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Immune selection for altered antigen processing leads to cytotoxic T lymphocyte escape in chronic HIV-1 infection.
Draenert R, Le Gall S, Pfafferott KJ, Leslie AJ, Chetty P, Brander C, Holmes EC, Chang SC, Feeney ME, Addo MM, Ruiz L, Ramduth D, Jeena P, Altfeld M, Thomas S, Tang Y, Verrill CL, Dixon C, Prado JG, Kiepiela P, Martinez-Picado J, Walker BD, Goulder PJ. Draenert R, et al. Among authors: holmes ec. J Exp Med. 2004 Apr 5;199(7):905-15. doi: 10.1084/jem.20031982. J Exp Med. 2004. PMID: 15067030 Free PMC article.
Serological evidence of sarbecovirus exposure along Sunda pangolin trafficking pathways.
Worthington BM, Wong PY, Kumaree KK, Prigge TL, Ng KH, Liao Y, Martelli P, Churgin S, Lee FK, Perkins C, Bradley M, Pierce MP, Shum MH, Miot EF, Cheung WY, McIlroy SE, Nash HC, Wirdateti, Semiadi G, Tan CW, Wang LF, Ades G, Baker DM, Dingle C, Pybus OG, Holmes EC, Leung GM, Guan Y, Zhu H, Bonebrake TC, Lam TTY. Worthington BM, et al. Among authors: holmes ec. BMC Biol. 2024 Nov 26;22(1):274. doi: 10.1186/s12915-024-02074-x. BMC Biol. 2024. PMID: 39593133 Free PMC article.
Dynamics and ecology of a multi-stage expansion of Oropouche virus in Brazil.
Tegally H, Dellicour S, Poongavanan J, Mavian C, Dor G, Fonseca V, Tagliamonte MS, Dunaiski M, Moir M, Wilkinson E, de Albuquerque CFC, Frutuoso LCV; CLIMADE Consortium; Holmes EC, Baxter C, Lessells R, Kraemer MUG, Lourenço J, Alcantara LCJ, de Oliveira T, Giovanetti M. Tegally H, et al. Among authors: holmes ec. medRxiv [Preprint]. 2024 Oct 30:2024.10.29.24316328. doi: 10.1101/2024.10.29.24316328. medRxiv. 2024. PMID: 39574858 Free PMC article. Preprint.
Contrasting dynamics of two incursions of low-pathogenicity avian influenza virus into Australia.
Wille M, Broz I, Cherrington T, Crawley A, Farrugia B, Ford M, Frost M, Grimsey J, Kirkland PD, Latimore S, Lynch SE, Martin S, Matereke C, Mee PT, Neave MJ, O'Dea M, Read AJ, O'Riley K, Stevens V, Thayaparan S, Zufan S, Ban de Gouvea Pedroso S, Grillo V, Breed AC, Barr IG, Holmes EC, Klaassen M, Wong FYK. Wille M, et al. Among authors: holmes ec. Virus Evol. 2024 Sep 10;10(1):veae076. doi: 10.1093/ve/veae076. eCollection 2024. Virus Evol. 2024. PMID: 39416286 Free PMC article.
Using artificial intelligence to document the hidden RNA virosphere.
Hou X, He Y, Fang P, Mei SQ, Xu Z, Wu WC, Tian JH, Zhang S, Zeng ZY, Gou QY, Xin GY, Le SJ, Xia YY, Zhou YL, Hui FM, Pan YF, Eden JS, Yang ZH, Han C, Shu YL, Guo D, Li J, Holmes EC, Li ZR, Shi M. Hou X, et al. Among authors: holmes ec. Cell. 2024 Nov 27;187(24):6929-6942.e16. doi: 10.1016/j.cell.2024.09.027. Epub 2024 Oct 9. Cell. 2024. PMID: 39389057 Free article.
A virus associated with the zoonotic pathogen Plasmodium knowlesi causing human malaria is a member of a diverse and unclassified viral taxon.
Petrone ME, Charon J, Grigg MJ, William T, Rajahram GS, Westaway J, Piera KA, Shi M, Anstey NM, Holmes EC. Petrone ME, et al. Among authors: holmes ec. bioRxiv [Preprint]. 2024 Sep 19:2024.09.18.613759. doi: 10.1101/2024.09.18.613759. bioRxiv. 2024. Update in: Virus Evol. 2024 Nov 06;10(1):veae091. doi: 10.1093/ve/veae091 PMID: 39345442 Free PMC article. Updated. Preprint.
967 results