Karplus M - Search Results

1

A normal mode analysis of structural plasticity in the biomolecular motor F(1)-ATPase.

Cui Q, Li G, Ma J, Karplus M. Cui Q, et al. Among authors: karplus m. J Mol Biol. 2004 Jul 2;340(2):345-72. doi: 10.1016/j.jmb.2004.04.044. J Mol Biol. 2004. PMID: 15201057

2

Ligand-induced conformational changes in ras p21: a normal mode and energy minimization analysis.

Ma J, Karplus M. Ma J, et al. Among authors: karplus m. J Mol Biol. 1997 Nov 21;274(1):114-31. doi: 10.1006/jmbi.1997.1313. J Mol Biol. 1997. PMID: 9398520

3

The allosteric mechanism of yeast chorismate mutase: a dynamic analysis.

Kong Y, Ma J, Karplus M, Lipscomb WN. Kong Y, et al. Among authors: karplus m. J Mol Biol. 2006 Feb 10;356(1):237-47. doi: 10.1016/j.jmb.2005.10.064. Epub 2005 Nov 10. J Mol Biol. 2006. PMID: 16337651

4

A dynamic analysis of the rotation mechanism for conformational change in F(1)-ATPase.

Ma J, Flynn TC, Cui Q, Leslie AG, Walker JE, Karplus M. Ma J, et al. Among authors: karplus m. Structure. 2002 Jul;10(7):921-31. doi: 10.1016/s0969-2126(02)00789-x. Structure. 2002. PMID: 12121647 Free article.

5

Catalysis and specificity in enzymes: a study of triosephosphate isomerase and comparison with methyl glyoxal synthase.

Cui Q, Karplus M. Cui Q, et al. Among authors: karplus m. Adv Protein Chem. 2003;66:315-72. doi: 10.1016/s0065-3233(03)66008-0. Adv Protein Chem. 2003. PMID: 14631822 Review. No abstract available.

6

Allostery and cooperativity revisited.

Cui Q, Karplus M. Cui Q, et al. Among authors: karplus m. Protein Sci. 2008 Aug;17(8):1295-307. doi: 10.1110/ps.03259908. Epub 2008 Jun 17. Protein Sci. 2008. PMID: 18560010 Free PMC article. Review.

7

A dynamic model for the allosteric mechanism of GroEL.

Ma J, Sigler PB, Xu Z, Karplus M. Ma J, et al. Among authors: karplus m. J Mol Biol. 2000 Sep 15;302(2):303-13. doi: 10.1006/jmbi.2000.4014. J Mol Biol. 2000. PMID: 10970735

8

The missing link between thermodynamics and structure in F1-ATPase.

Yang W, Gao YQ, Cui Q, Ma J, Karplus M. Yang W, et al. Among authors: karplus m. Proc Natl Acad Sci U S A. 2003 Feb 4;100(3):874-9. doi: 10.1073/pnas.0337432100. Epub 2003 Jan 27. Proc Natl Acad Sci U S A. 2003. PMID: 12552084 Free PMC article.

9

Molecular switch in signal transduction: reaction paths of the conformational changes in ras p21.

Ma J, Karplus M. Ma J, et al. Among authors: karplus m. Proc Natl Acad Sci U S A. 1997 Oct 28;94(22):11905-10. doi: 10.1073/pnas.94.22.11905. Proc Natl Acad Sci U S A. 1997. PMID: 9342335 Free PMC article.

10

The allosteric mechanism of the chaperonin GroEL: a dynamic analysis.

Ma J, Karplus M. Ma J, et al. Among authors: karplus m. Proc Natl Acad Sci U S A. 1998 Jul 21;95(15):8502-7. doi: 10.1073/pnas.95.15.8502. Proc Natl Acad Sci U S A. 1998. PMID: 9671707 Free PMC article.

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