Skrabanek L - Search Results

1

Quantitative information management for the biochemical computation of cellular networks.

Campagne F, Neves S, Chang CW, Skrabanek L, Ram PT, Iyengar R, Weinstein H. Campagne F, et al. Among authors: skrabanek l. Sci STKE. 2004 Aug 24;2004(248):pl11. doi: 10.1126/stke.2482004pl11. Sci STKE. 2004. PMID: 15340175

2

TissueInfo: high-throughput identification of tissue expression profiles and specificity.

Skrabanek L, Campagne F. Skrabanek L, et al. Nucleic Acids Res. 2001 Nov 1;29(21):E102-2. doi: 10.1093/nar/29.21.e102. Nucleic Acids Res. 2001. PMID: 11691939 Free PMC article.

3

Building protein diagrams on the web with the residue-based diagram editor RbDe.

Skrabanek L, Campagne F, Weinstein H. Skrabanek L, et al. Nucleic Acids Res. 2003 Jul 1;31(13):3856-8. doi: 10.1093/nar/gkg552. Nucleic Acids Res. 2003. PMID: 12824436 Free PMC article.

4

Characterization of the mouse adeno-associated virus AAVS1 ortholog.

Dutheil N, Yoon-Robarts M, Ward P, Henckaerts E, Skrabanek L, Berns KI, Campagne F, Linden RM. Dutheil N, et al. Among authors: skrabanek l. J Virol. 2004 Aug;78(16):8917-21. doi: 10.1128/JVI.78.16.8917-8921.2004. J Virol. 2004. PMID: 15280500 Free PMC article.

5

PDZBase: a protein-protein interaction database for PDZ-domains.

Beuming T, Skrabanek L, Niv MY, Mukherjee P, Weinstein H. Beuming T, et al. Among authors: skrabanek l. Bioinformatics. 2005 Mar;21(6):827-8. doi: 10.1093/bioinformatics/bti098. Epub 2004 Oct 28. Bioinformatics. 2005. PMID: 15513994

6

Mining expressed sequence tags identifies cancer markers of clinical interest.

Campagne F, Skrabanek L. Campagne F, et al. Among authors: skrabanek l. BMC Bioinformatics. 2006 Nov 1;7:481. doi: 10.1186/1471-2105-7-481. BMC Bioinformatics. 2006. PMID: 17078886 Free PMC article.

7

Modeling activated states of GPCRs: the rhodopsin template.

Niv MY, Skrabanek L, Filizola M, Weinstein H. Niv MY, et al. Among authors: skrabanek l. J Comput Aided Mol Des. 2006 Jul-Aug;20(7-8):437-48. doi: 10.1007/s10822-006-9061-3. Epub 2006 Nov 11. J Comput Aided Mol Des. 2006. PMID: 17103019 Free PMC article.

8

Requirements and ontology for a G protein-coupled receptor oligomerization knowledge base.

Skrabanek L, Murcia M, Bouvier M, Devi L, George SR, Lohse MJ, Milligan G, Neubig R, Palczewski K, Parmentier M, Pin JP, Vriend G, Javitch JA, Campagne F, Filizola M. Skrabanek L, et al. BMC Bioinformatics. 2007 May 30;8:177. doi: 10.1186/1471-2105-8-177. BMC Bioinformatics. 2007. PMID: 17537266 Free PMC article.

9

Identification of GATC- and CCGG-recognizing Type II REases and their putative specificity-determining positions using Scan2S--a novel motif scan algorithm with optional secondary structure constraints.

Niv MY, Skrabanek L, Roberts RJ, Scheraga HA, Weinstein H. Niv MY, et al. Among authors: skrabanek l. Proteins. 2008 May 1;71(2):631-40. doi: 10.1002/prot.21777. Proteins. 2008. PMID: 17972284 Free PMC article.

10

Computational prediction of protein-protein interactions.

Skrabanek L, Saini HK, Bader GD, Enright AJ. Skrabanek L, et al. Mol Biotechnol. 2008 Jan;38(1):1-17. doi: 10.1007/s12033-007-0069-2. Epub 2007 Aug 14. Mol Biotechnol. 2008. PMID: 18095187 Review.

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