Kowalak JA - Search Results

1

DBParser: web-based software for shotgun proteomic data analyses.

Yang X, Dondeti V, Dezube R, Maynard DM, Geer LY, Epstein J, Chen X, Markey SP, Kowalak JA. Yang X, et al. Among authors: kowalak ja. J Proteome Res. 2004 Sep-Oct;3(5):1002-8. doi: 10.1021/pr049920x. J Proteome Res. 2004. PMID: 15473689

2

Open mass spectrometry search algorithm.

Geer LY, Markey SP, Kowalak JA, Wagner L, Xu M, Maynard DM, Yang X, Shi W, Bryant SH. Geer LY, et al. Among authors: kowalak ja. J Proteome Res. 2004 Sep-Oct;3(5):958-64. doi: 10.1021/pr0499491. J Proteome Res. 2004. PMID: 15473683

3

Assessing data quality of peptide mass spectra obtained by quadrupole ion trap mass spectrometry.

Xu M, Geer LY, Bryant SH, Roth JS, Kowalak JA, Maynard DM, Markey SP. Xu M, et al. Among authors: kowalak ja. J Proteome Res. 2005 Mar-Apr;4(2):300-5. doi: 10.1021/pr049844y. J Proteome Res. 2005. PMID: 15822904

4

Characterizing complex peptide mixtures using a multi-dimensional liquid chromatography-mass spectrometry system: Saccharomyces cerevisiae as a model system.

Maynard DM, Masuda J, Yang X, Kowalak JA, Markey SP. Maynard DM, et al. Among authors: kowalak ja. J Chromatogr B Analyt Technol Biomed Life Sci. 2004 Oct 15;810(1):69-76. doi: 10.1016/j.jchromb.2004.07.015. J Chromatogr B Analyt Technol Biomed Life Sci. 2004. PMID: 15358309

5

Fully automated micro- and nanoscale one- or two-dimensional high-performance liquid chromatography system for liquid chromatography-mass spectrometry compatible with non-volatile salts for ion exchange chromatography.

Masuda J, Maynard DM, Nishimura M, Ueda T, Kowalak JA, Markey SP. Masuda J, et al. Among authors: kowalak ja. J Chromatogr A. 2005 Jan 21;1063(1-2):57-69. doi: 10.1016/j.chroma.2004.11.084. J Chromatogr A. 2005. PMID: 15700457

6

Analysis of TRPC3-interacting proteins by tandem mass spectrometry.

Lockwich T, Pant J, Makusky A, Jankowska-Stephens E, Kowalak JA, Markey SP, Ambudkar IS. Lockwich T, et al. Among authors: kowalak ja. J Proteome Res. 2008 Mar;7(3):979-89. doi: 10.1021/pr070496k. Epub 2008 Jan 19. J Proteome Res. 2008. PMID: 18205297

7

A coordinated proteomic approach for identifying proteins that interact with the E. coli ribosomal protein S12.

Strader MB, Hervey WJ 4th, Costantino N, Fujigaki S, Chen CY, Akal-Strader A, Ihunnah CA, Makusky AJ, Court DL, Markey SP, Kowalak JA. Strader MB, et al. Among authors: kowalak ja. J Proteome Res. 2013 Mar 1;12(3):1289-99. doi: 10.1021/pr3009435. Epub 2013 Feb 1. J Proteome Res. 2013. PMID: 23305560 Free PMC article.

8

A proteomic and transcriptomic approach reveals new insight into beta-methylthiolation of Escherichia coli ribosomal protein S12.

Strader MB, Costantino N, Elkins CA, Chen CY, Patel I, Makusky AJ, Choy JS, Court DL, Markey SP, Kowalak JA. Strader MB, et al. Among authors: kowalak ja. Mol Cell Proteomics. 2011 Mar;10(3):M110.005199. doi: 10.1074/mcp.M110.005199. Epub 2010 Dec 17. Mol Cell Proteomics. 2011. PMID: 21169565 Free PMC article.

9

Gbetagamma affinity for bovine rhodopsin is determined by the carboxyl-terminal sequences of the gamma subunit.

Jian X, Clark WA, Kowalak J, Markey SP, Simonds WF, Northup JK. Jian X, et al. J Biol Chem. 2001 Dec 21;276(51):48518-25. doi: 10.1074/jbc.M107129200. Epub 2001 Oct 15. J Biol Chem. 2001. PMID: 11602594 Free article.

10

Nitration and inactivation of IDO by peroxynitrite.

Fujigaki H, Saito K, Lin F, Fujigaki S, Takahashi K, Martin BM, Chen CY, Masuda J, Kowalak J, Takikawa O, Seishima M, Markey SP. Fujigaki H, et al. J Immunol. 2006 Jan 1;176(1):372-9. doi: 10.4049/jimmunol.176.1.372. J Immunol. 2006. PMID: 16365430

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