Varré JS - Search Results

1

Evolution of plant-like crystalline storage polysaccharide in the protozoan parasite Toxoplasma gondii argues for a red alga ancestry.

Coppin A, Varré JS, Lienard L, Dauvillée D, Guérardel Y, Soyer-Gobillard MO, Buléon A, Ball S, Tomavo S. Coppin A, et al. Among authors: varre js. J Mol Evol. 2005 Feb;60(2):257-67. doi: 10.1007/s00239-004-0185-6. J Mol Evol. 2005. PMID: 15785854

2

Structural and content diversity of mitochondrial genome in beet: a comparative genomic analysis.

Darracq A, Varré JS, Maréchal-Drouard L, Courseaux A, Castric V, Saumitou-Laprade P, Oztas S, Lenoble P, Vacherie B, Barbe V, Touzet P. Darracq A, et al. Among authors: varre js. Genome Biol Evol. 2011;3:723-36. doi: 10.1093/gbe/evr042. Epub 2011 May 21. Genome Biol Evol. 2011. PMID: 21602571 Free PMC article.

3

Reproductive isolation among lineages of Silene nutans (Caryophyllaceae): A potential involvement of plastid-nuclear incompatibilities.

Postel Z, Poux C, Gallina S, Varré JS, Godé C, Schmitt E, Meyer E, Van Rossum F, Touzet P. Postel Z, et al. Among authors: varre js. Mol Phylogenet Evol. 2022 Apr;169:107436. doi: 10.1016/j.ympev.2022.107436. Epub 2022 Feb 4. Mol Phylogenet Evol. 2022. PMID: 35131426

4

A scenario of mitochondrial genome evolution in maize based on rearrangement events.

Darracq A, Varré JS, Touzet P. Darracq A, et al. Among authors: varre js. BMC Genomics. 2010 Apr 9;11:233. doi: 10.1186/1471-2164-11-233. BMC Genomics. 2010. PMID: 20380689 Free PMC article.

5

Efficient and accurate P-value computation for Position Weight Matrices.

Touzet H, Varré JS. Touzet H, et al. Among authors: varre js. Algorithms Mol Biol. 2007 Dec 11;2:15. doi: 10.1186/1748-7188-2-15. Algorithms Mol Biol. 2007. PMID: 18072973 Free PMC article.

6

Complete Sequence, Multichromosomal Architecture and Transcriptome Analysis of the Solanum tuberosum Mitochondrial Genome.

Varré JS, D'Agostino N, Touzet P, Gallina S, Tamburino R, Cantarella C, Ubrig E, Cardi T, Drouard L, Gualberto JM, Scotti N. Varré JS, et al. Int J Mol Sci. 2019 Sep 26;20(19):4788. doi: 10.3390/ijms20194788. Int J Mol Sci. 2019. PMID: 31561566 Free PMC article.

7

Genome dedoubling by DCJ and reversal.

Thomas A, Varré JS, Ouangraoua A. Thomas A, et al. Among authors: varre js. BMC Bioinformatics. 2011 Oct 5;12 Suppl 9(Suppl 9):S20. doi: 10.1186/1471-2105-12-S9-S20. BMC Bioinformatics. 2011. PMID: 22152053 Free PMC article.

8

Transformation distances: a family of dissimilarity measures based on movements of segments.

Varré JS, Delahaye JP, Rivals E. Varré JS, et al. Bioinformatics. 1999 Mar;15(3):194-202. doi: 10.1093/bioinformatics/15.3.194. Bioinformatics. 1999. PMID: 10222406

9

Graph analysis of fragmented long-read bacterial genome assemblies.

Marijon P, Chikhi R, Varré JS. Marijon P, et al. Among authors: varre js. Bioinformatics. 2019 Nov 1;35(21):4239-4246. doi: 10.1093/bioinformatics/btz219. Bioinformatics. 2019. PMID: 30918948

10

ProCARs: Progressive Reconstruction of Ancestral Gene Orders.

Perrin A, Varré JS, Blanquart S, Ouangraoua A. Perrin A, et al. Among authors: varre js. BMC Genomics. 2015;16 Suppl 5(Suppl 5):S6. doi: 10.1186/1471-2164-16-S5-S6. Epub 2015 May 26. BMC Genomics. 2015. PMID: 26040958 Free PMC article.

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