Gao W - Search Results

1

pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry.

Li D, Fu Y, Sun R, Ling CX, Wei Y, Zhou H, Zeng R, Yang Q, He S, Gao W. Li D, et al. Among authors: gao w. Bioinformatics. 2005 Jul 1;21(13):3049-50. doi: 10.1093/bioinformatics/bti439. Epub 2005 Apr 7. Bioinformatics. 2005. PMID: 15817687

2

Exploiting the kernel trick to correlate fragment ions for peptide identification via tandem mass spectrometry.

Fu Y, Yang Q, Sun R, Li D, Zeng R, Ling CX, Gao W. Fu Y, et al. Among authors: gao w. Bioinformatics. 2004 Aug 12;20(12):1948-54. doi: 10.1093/bioinformatics/bth186. Epub 2004 Mar 25. Bioinformatics. 2004. PMID: 15044235

3

Preprocessing of tandem mass spectrometric data based on decision tree classification.

Zhang JF, He SM, Cai JJ, Cao XJ, Sun RX, Fu Y, Zeng R, Gao W. Zhang JF, et al. Among authors: gao w. Genomics Proteomics Bioinformatics. 2005 Nov;3(4):231-7. doi: 10.1016/s1672-0229(05)03032-9. Genomics Proteomics Bioinformatics. 2005. PMID: 16689691 Free PMC article.

4

IndexToolkit: an open source toolbox to index protein databases for high-throughput proteomics.

Li D, Gao W, Ling CX, Wang X, Sun R, He S. Li D, et al. Among authors: gao w. Bioinformatics. 2006 Oct 15;22(20):2572-3. doi: 10.1093/bioinformatics/btl410. Epub 2006 Aug 31. Bioinformatics. 2006. PMID: 16945944

5

Predicting molecular formulas of fragment ions with isotope patterns in tandem mass spectra.

Zhang J, Gao W, Cai J, He S, Zeng R, Chen R. Zhang J, et al. Among authors: gao w. IEEE/ACM Trans Comput Biol Bioinform. 2005 Jul-Sep;2(3):217-30. doi: 10.1109/TCBB.2005.43. IEEE/ACM Trans Comput Biol Bioinform. 2005. PMID: 17044185

6

An SVM scorer for more sensitive and reliable peptide identification via tandem mass spectrometry.

Wang H, Fu Y, Sun R, He S, Zeng R, Gao W. Wang H, et al. Among authors: gao w. Pac Symp Biocomput. 2006:303-14. Pac Symp Biocomput. 2006. PMID: 17094248 Free article.

7

pFind 2.0: a software package for peptide and protein identification via tandem mass spectrometry.

Wang LH, Li DQ, Fu Y, Wang HP, Zhang JF, Yuan ZF, Sun RX, Zeng R, He SM, Gao W. Wang LH, et al. Among authors: gao w. Rapid Commun Mass Spectrom. 2007;21(18):2985-91. doi: 10.1002/rcm.3173. Rapid Commun Mass Spectrom. 2007. PMID: 17702057

8

Mining tandem mass spectral data to develop a more accurate mass error model for peptide identification.

Fu Y, Gao W, He S, Sun R, Zhou H, Zeng R. Fu Y, et al. Among authors: gao w. Pac Symp Biocomput. 2007:421-32. Pac Symp Biocomput. 2007. PMID: 17990507 Free article.

9

PeakSelect: preprocessing tandem mass spectra for better peptide identification.

Zhang J, He S, Ling CX, Cao X, Zeng R, Gao W. Zhang J, et al. Among authors: gao w. Rapid Commun Mass Spectrom. 2008 Apr;22(8):1203-12. doi: 10.1002/rcm.3488. Rapid Commun Mass Spectrom. 2008. PMID: 18350561

10

Efficient discovery of abundant post-translational modifications and spectral pairs using peptide mass and retention time differences.

Fu Y, Jia W, Lu Z, Wang H, Yuan Z, Chi H, Li Y, Xiu L, Wang W, Liu C, Wang L, Sun R, Gao W, Qian X, He SM. Fu Y, et al. Among authors: gao w. BMC Bioinformatics. 2009 Jan 30;10 Suppl 1(Suppl 1):S50. doi: 10.1186/1471-2105-10-S1-S50. BMC Bioinformatics. 2009. PMID: 19208153 Free PMC article.

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