Tran TT - Search Results

1

A convenient method for synthesis of cyclic peptide libraries.

Bourne GT, Nielson JL, Coughlan JF, Darwen P, Campitelli MR, Horton DA, Rhümann A, Love SG, Tran TT, Smythe ML. Bourne GT, et al. Among authors: tran tt. Methods Mol Biol. 2005;298:151-65. doi: 10.1385/1-59259-877-3:151. Methods Mol Biol. 2005. PMID: 16044546

2

A gradient descent algorithm for minimizing amino acid coupling reactions when synthesizing cyclic-peptide libraries.

Darwen PJ, Tran TT, Bourne GT, Nielson JL, Smythe ML. Darwen PJ, et al. Among authors: tran tt. Comb Chem High Throughput Screen. 2006 Aug;9(7):559-63. doi: 10.2174/138620706777935333. Comb Chem High Throughput Screen. 2006. PMID: 16925515

3

Library of biphenyl privileged substructures using a safety-catch linker approach.

Severinsen R, Bourne GT, Tran TT, Ankersen M, Begtrup M, Smythe ML. Severinsen R, et al. Among authors: tran tt. J Comb Chem. 2008 Jul-Aug;10(4):557-66. doi: 10.1021/cc800006g. Epub 2008 May 8. J Comb Chem. 2008. PMID: 18462009

4

Intramolecular disulphide bond arrangements in nonhomologous proteins.

Hartig GR, Tran TT, Smythe ML. Hartig GR, et al. Among authors: tran tt. Protein Sci. 2005 Feb;14(2):474-82. doi: 10.1110/ps.04923305. Protein Sci. 2005. PMID: 15659377 Free PMC article.

5

A subset-orientated algorithm for minimizing the number of steps required for synthesis of cyclic-peptide libraries.

Tran TT, Bryant D, Smythe M. Tran TT, et al. Comput Chem. 2002 Jan;26(2):113-7. doi: 10.1016/s0097-8485(01)00087-0. Comput Chem. 2002. PMID: 11778933

6

Topological side-chain classification of beta-turns: ideal motifs for peptidomimetic development.

Tran TT, McKie J, Meutermans WD, Bourne GT, Andrews PR, Smythe ML. Tran TT, et al. J Comput Aided Mol Des. 2005 Aug;19(8):551-66. doi: 10.1007/s10822-005-9006-2. Epub 2005 Nov 23. J Comput Aided Mol Des. 2005. PMID: 16328857

7

Defining scaffold geometries for interacting with proteins: geometrical classification of secondary structure linking regions.

Tran TT, Kulis C, Long SM, Bryant D, Adams P, Smythe ML. Tran TT, et al. J Comput Aided Mol Des. 2010 Nov;24(11):917-34. doi: 10.1007/s10822-010-9384-y. Epub 2010 Sep 23. J Comput Aided Mol Des. 2010. PMID: 20862601

8

Conformational searching using a population-based incremental learning algorithm.

Long SM, Tran TT, Adams P, Darwen P, Smythe ML. Long SM, et al. Among authors: tran tt. J Comput Chem. 2011 Jun;32(8):1541-9. doi: 10.1002/jcc.21732. Epub 2011 Feb 1. J Comput Chem. 2011. PMID: 21284005

9

Clustering of disulfide-rich peptides provides scaffolds for hit discovery by phage display: application to interleukin-23.

Barkan DT, Cheng XL, Celino H, Tran TT, Bhandari A, Craik CS, Sali A, Smythe ML. Barkan DT, et al. Among authors: tran tt. BMC Bioinformatics. 2016 Nov 23;17(1):481. doi: 10.1186/s12859-016-1350-9. BMC Bioinformatics. 2016. PMID: 27881076 Free PMC article.

10

Discovery and Characterization of a Potent Interleukin-6 Binding Peptide with Neutralizing Activity In Vivo.

Ranganath S, Bhandari A, Avitahl-Curtis N, McMahon J, Wachtel D, Zhang J, Leitheiser C, Bernier SG, Liu G, Tran TT, Celino H, Tobin J, Jung J, Zhao H, Glen KE, Graul C, Griffin A, Schairer WC, Higgins C, Reza TL, Mowe E, Rivers S, Scott S, Monreal A, Shea C, Bourne G, Coons C, Smith A, Tang K, Mandyam RA, Masferrer J, Liu D, Patel DV, Fretzen A, Murphy CA, Milne GT, Smythe ML, Carlson KE. Ranganath S, et al. Among authors: tran tt. PLoS One. 2015 Nov 10;10(11):e0141330. doi: 10.1371/journal.pone.0141330. eCollection 2015. PLoS One. 2015. PMID: 26555695 Free PMC article.

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