Backofen R - Search Results

1

Non-EST based prediction of exon skipping and intron retention events using Pfam information.

Hiller M, Huse K, Platzer M, Backofen R. Hiller M, et al. Among authors: backofen r. Nucleic Acids Res. 2005 Oct 4;33(17):5611-21. doi: 10.1093/nar/gki870. Print 2005. Nucleic Acids Res. 2005. PMID: 16204458 Free PMC article.

2

Efficient prediction of alternative splice forms using protein domain homology.

Hiller M, Backofen R, Heymann S, Busch A, Glaesser TM, Freytag JC. Hiller M, et al. Among authors: backofen r. In Silico Biol. 2004;4(2):195-208. In Silico Biol. 2004. PMID: 15107023

3

Widespread occurrence of alternative splicing at NAGNAG acceptors contributes to proteome plasticity.

Hiller M, Huse K, Szafranski K, Jahn N, Hampe J, Schreiber S, Backofen R, Platzer M. Hiller M, et al. Among authors: backofen r. Nat Genet. 2004 Dec;36(12):1255-7. doi: 10.1038/ng1469. Epub 2004 Oct 31. Nat Genet. 2004. PMID: 15516930

4

Creation and disruption of protein features by alternative splicing -- a novel mechanism to modulate function.

Hiller M, Huse K, Platzer M, Backofen R. Hiller M, et al. Among authors: backofen r. Genome Biol. 2005;6(7):R58. doi: 10.1186/gb-2005-6-7-r58. Epub 2005 Jun 22. Genome Biol. 2005. PMID: 15998447 Free PMC article.

5

Single-nucleotide polymorphisms in NAGNAG acceptors are highly predictive for variations of alternative splicing.

Hiller M, Huse K, Szafranski K, Jahn N, Hampe J, Schreiber S, Backofen R, Platzer M. Hiller M, et al. Among authors: backofen r. Am J Hum Genet. 2006 Feb;78(2):291-302. doi: 10.1086/500151. Epub 2005 Dec 22. Am J Hum Genet. 2006. PMID: 16400609 Free PMC article.

6

Phylogenetically widespread alternative splicing at unusual GYNGYN donors.

Hiller M, Huse K, Szafranski K, Rosenstiel P, Schreiber S, Backofen R, Platzer M. Hiller M, et al. Among authors: backofen r. Genome Biol. 2006;7(7):R65. doi: 10.1186/gb-2006-7-7-R65. Genome Biol. 2006. PMID: 16869967 Free PMC article.

7

Sequencing errors or SNPs at splice-acceptor guanines in dbSNP?

Platzer M, Hiller M, Szafranski K, Jahn N, Hampe J, Schreiber S, Backofen R, Huse K. Platzer M, et al. Among authors: backofen r. Nat Biotechnol. 2006 Sep;24(9):1068-70. doi: 10.1038/nbt0906-1068b. Nat Biotechnol. 2006. PMID: 16964207 No abstract available.

8

Using RNA secondary structures to guide sequence motif finding towards single-stranded regions.

Hiller M, Pudimat R, Busch A, Backofen R. Hiller M, et al. Among authors: backofen r. Nucleic Acids Res. 2006;34(17):e117. doi: 10.1093/nar/gkl544. Epub 2006 Sep 20. Nucleic Acids Res. 2006. PMID: 16987907 Free PMC article.

9

Alternative splicing at NAGNAG acceptors: simply noise or noise and more?

Hiller M, Szafranski K, Backofen R, Platzer M. Hiller M, et al. Among authors: backofen r. PLoS Genet. 2006 Nov 24;2(11):e207; author reply e208. doi: 10.1371/journal.pgen.0020207. PLoS Genet. 2006. PMID: 17121470 Free PMC article. No abstract available.

10

TassDB: a database of alternative tandem splice sites.

Hiller M, Nikolajewa S, Huse K, Szafranski K, Rosenstiel P, Schuster S, Backofen R, Platzer M. Hiller M, et al. Among authors: backofen r. Nucleic Acids Res. 2007 Jan;35(Database issue):D188-92. doi: 10.1093/nar/gkl762. Epub 2006 Nov 16. Nucleic Acids Res. 2007. PMID: 17142241 Free PMC article.

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