Jaroszewski L - Search Results

1

Crystal structure of virulence factor CJ0248 from Campylobacter jejuni at 2.25 A resolution reveals a new fold.

Xu Q, Schwarzenbacher R, McMullan D, Abdubek P, Agarwalla S, Ambing E, Axelrod H, Biorac T, Canaves JM, Chiu HJ, Deacon AM, DiDonato M, Elsliger MA, Godzik A, Grittini C, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Hornsby M, Jaroszewski L, Klock HE, Koesema E, Kreusch A, Kuhn P, Lesley SA, Miller MD, Moy K, Nigoghossian E, Paulsen J, Quijano K, Reyes R, Rife C, Spraggon G, Stevens RC, van den Bedem H, Velasquez J, White A, Wolf G, Hodgson KO, Wooley J, Wilson IA. Xu Q, et al. Among authors: jaroszewski l. Proteins. 2006 Jan 1;62(1):292-6. doi: 10.1002/prot.20611. Proteins. 2006. PMID: 16287129 No abstract available.

2

Derivation and testing of pair potentials for protein folding. When is the quasichemical approximation correct?

Skolnick J, Jaroszewski L, Kolinski A, Godzik A. Skolnick J, et al. Among authors: jaroszewski l. Protein Sci. 1997 Mar;6(3):676-88. doi: 10.1002/pro.5560060317. Protein Sci. 1997. PMID: 9070450 Free PMC article.

3

Fold prediction by a hierarchy of sequence, threading, and modeling methods.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Jaroszewski L, et al. Protein Sci. 1998 Jun;7(6):1431-40. doi: 10.1002/pro.5560070620. Protein Sci. 1998. PMID: 9655348 Free PMC article.

4

Comparison of sequence profiles. Strategies for structural predictions using sequence information.

Rychlewski L, Jaroszewski L, Li W, Godzik A. Rychlewski L, et al. Among authors: jaroszewski l. Protein Sci. 2000 Feb;9(2):232-41. doi: 10.1110/ps.9.2.232. Protein Sci. 2000. PMID: 10716175 Free PMC article.

5

ATP-activated oligomerization as a mechanism for apoptosis regulation: fold and mechanism prediction for CED-4.

Jaroszewski L, Rychlewski L, Reed JC, Godzik A. Jaroszewski L, et al. Proteins. 2000 May 15;39(3):197-203. doi: 10.1002/(sici)1097-0134(20000515)39:3<197::aid-prot10>3.0.co;2-v. Proteins. 2000. PMID: 10737940

6

Improving the quality of twilight-zone alignments.

Jaroszewski L, Rychlewski L, Godzik A. Jaroszewski L, et al. Protein Sci. 2000 Aug;9(8):1487-96. doi: 10.1110/ps.9.8.1487. Protein Sci. 2000. PMID: 10975570 Free PMC article.

7

Search for a new description of protein topology and local structure.

Jaroszewski L, Godzik A. Jaroszewski L, et al. Proc Int Conf Intell Syst Mol Biol. 2000;8:211-7. Proc Int Conf Intell Syst Mol Biol. 2000. PMID: 10977082

8

Clustering of highly homologous sequences to reduce the size of large protein databases.

Li W, Jaroszewski L, Godzik A. Li W, et al. Among authors: jaroszewski l. Bioinformatics. 2001 Mar;17(3):282-3. doi: 10.1093/bioinformatics/17.3.282. Bioinformatics. 2001. PMID: 11294794

9

Tolerating some redundancy significantly speeds up clustering of large protein databases.

Li W, Jaroszewski L, Godzik A. Li W, et al. Among authors: jaroszewski l. Bioinformatics. 2002 Jan;18(1):77-82. doi: 10.1093/bioinformatics/18.1.77. Bioinformatics. 2002. PMID: 11836214

10

In search for more accurate alignments in the twilight zone.

Jaroszewski L, Li W, Godzik A. Jaroszewski L, et al. Protein Sci. 2002 Jul;11(7):1702-13. doi: 10.1110/ps.4820102. Protein Sci. 2002. PMID: 12070323 Free PMC article.

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