Randall A - Search Results

1

Prediction of protein stability changes for single-site mutations using support vector machines.

Cheng J, Randall A, Baldi P. Cheng J, et al. Among authors: randall a. Proteins. 2006 Mar 1;62(4):1125-32. doi: 10.1002/prot.20810. Proteins. 2006. PMID: 16372356

2

SCRATCH: a protein structure and structural feature prediction server.

Cheng J, Randall AZ, Sweredoski MJ, Baldi P. Cheng J, et al. Among authors: randall az. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W72-6. doi: 10.1093/nar/gki396. Nucleic Acids Res. 2005. PMID: 15980571 Free PMC article.

3

TMBpro: secondary structure, beta-contact and tertiary structure prediction of transmembrane beta-barrel proteins.

Randall A, Cheng J, Sweredoski M, Baldi P. Randall A, et al. Bioinformatics. 2008 Feb 15;24(4):513-20. doi: 10.1093/bioinformatics/btm548. Epub 2007 Nov 15. Bioinformatics. 2008. PMID: 18006547

4

SELECTpro: effective protein model selection using a structure-based energy function resistant to BLUNDERs.

Randall A, Baldi P. Randall A, et al. BMC Struct Biol. 2008 Dec 3;8:52. doi: 10.1186/1472-6807-8-52. BMC Struct Biol. 2008. PMID: 19055744 Free PMC article.

5

SOLpro: accurate sequence-based prediction of protein solubility.

Magnan CN, Randall A, Baldi P. Magnan CN, et al. Among authors: randall a. Bioinformatics. 2009 Sep 1;25(17):2200-7. doi: 10.1093/bioinformatics/btp386. Epub 2009 Jun 23. Bioinformatics. 2009. PMID: 19549632

6

SIDEpro: a novel machine learning approach for the fast and accurate prediction of side-chain conformations.

Nagata K, Randall A, Baldi P. Nagata K, et al. Among authors: randall a. Proteins. 2012 Jan;80(1):142-53. doi: 10.1002/prot.23170. Epub 2011 Nov 9. Proteins. 2012. PMID: 22072531 Free PMC article.

7

From protein microarrays to diagnostic antigen discovery: a study of the pathogen Francisella tularensis.

Sundaresh S, Randall A, Unal B, Petersen JM, Belisle JT, Hartley MG, Duffield M, Titball RW, Davies DH, Felgner PL, Baldi P. Sundaresh S, et al. Among authors: randall a. Bioinformatics. 2007 Jul 1;23(13):i508-18. doi: 10.1093/bioinformatics/btm207. Bioinformatics. 2007. PMID: 17646338

8

Computational and single-molecule force studies of a macro domain protein reveal a key molecular determinant for mechanical stability.

Guzmán DL, Randall A, Baldi P, Guan Z. Guzmán DL, et al. Among authors: randall a. Proc Natl Acad Sci U S A. 2010 Feb 2;107(5):1989-94. doi: 10.1073/pnas.0905796107. Epub 2010 Jan 13. Proc Natl Acad Sci U S A. 2010. PMID: 20080695 Free PMC article.

9

High-throughput prediction of protein antigenicity using protein microarray data.

Magnan CN, Zeller M, Kayala MA, Vigil A, Randall A, Felgner PL, Baldi P. Magnan CN, et al. Among authors: randall a. Bioinformatics. 2010 Dec 1;26(23):2936-43. doi: 10.1093/bioinformatics/btq551. Epub 2010 Oct 7. Bioinformatics. 2010. PMID: 20934990 Free PMC article.

10

Data-driven high-throughput prediction of the 3-D structure of small molecules: review and progress.

Andronico A, Randall A, Benz RW, Baldi P. Andronico A, et al. Among authors: randall a. J Chem Inf Model. 2011 Apr 25;51(4):760-76. doi: 10.1021/ci100223t. Epub 2011 Mar 18. J Chem Inf Model. 2011. PMID: 21417267 Free PMC article. Review.

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