Freund Y - Search Results

1

Profile-based string kernels for remote homology detection and motif extraction.

Kuang R, Ie E, Wang K, Wang K, Siddiqi M, Freund Y, Leslie C. Kuang R, et al. Among authors: freund y. Proc IEEE Comput Syst Bioinform Conf. 2004:152-60. doi: 10.1109/csb.2004.1332428. Proc IEEE Comput Syst Bioinform Conf. 2004. PMID: 16448009

2

Profile-based string kernels for remote homology detection and motif extraction.

Kuang R, Ie E, Wang K, Wang K, Siddiqi M, Freund Y, Leslie C. Kuang R, et al. Among authors: freund y. J Bioinform Comput Biol. 2005 Jun;3(3):527-50. doi: 10.1142/s021972000500120x. J Bioinform Comput Biol. 2005. PMID: 16108083

3

Predicting genetic regulatory response using classification.

Middendorf M, Kundaje A, Wiggins C, Freund Y, Leslie C. Middendorf M, et al. Among authors: freund y. Bioinformatics. 2004 Aug 4;20 Suppl 1:i232-40. doi: 10.1093/bioinformatics/bth923. Bioinformatics. 2004. PMID: 15262804

4

A classification-based framework for predicting and analyzing gene regulatory response.

Kundaje A, Middendorf M, Shah M, Wiggins CH, Freund Y, Leslie C. Kundaje A, et al. Among authors: freund y. BMC Bioinformatics. 2006 Mar 20;7 Suppl 1(Suppl 1):S5. doi: 10.1186/1471-2105-7-S1-S5. BMC Bioinformatics. 2006. PMID: 16723008 Free PMC article.

5

Minimizing off-target signals in RNA fluorescent in situ hybridization.

Arvey A, Hermann A, Hsia CC, Ie E, Freund Y, McGinnis W. Arvey A, et al. Among authors: freund y. Nucleic Acids Res. 2010 Jun;38(10):e115. doi: 10.1093/nar/gkq042. Epub 2010 Feb 17. Nucleic Acids Res. 2010. PMID: 20164092 Free PMC article.

6

An online learning approach to occlusion boundary detection.

Jacobson N, Freund Y, Nguyen TQ. Jacobson N, et al. Among authors: freund y. IEEE Trans Image Process. 2012 Jan;21(1):252-61. doi: 10.1109/TIP.2011.2162420. Epub 2011 Jul 22. IEEE Trans Image Process. 2012. PMID: 21788193

7

ResBoost: characterizing and predicting catalytic residues in enzymes.

Alterovitz R, Arvey A, Sankararaman S, Dallett C, Freund Y, Sjölander K. Alterovitz R, et al. Among authors: freund y. BMC Bioinformatics. 2009 Jun 27;10:197. doi: 10.1186/1471-2105-10-197. BMC Bioinformatics. 2009. PMID: 19558703 Free PMC article.

8

Visualization of individual Scr mRNAs during Drosophila embryogenesis yields evidence for transcriptional bursting.

Paré A, Lemons D, Kosman D, Beaver W, Freund Y, McGinnis W. Paré A, et al. Among authors: freund y. Curr Biol. 2009 Dec 15;19(23):2037-42. doi: 10.1016/j.cub.2009.10.028. Curr Biol. 2009. PMID: 19931455 Free PMC article.

9

Image-based crystal detection: a machine-learning approach.

Liu R, Freund Y, Spraggon G. Liu R, et al. Among authors: freund y. Acta Crystallogr D Biol Crystallogr. 2008 Dec;64(Pt 12):1187-95. doi: 10.1107/S090744490802982X. Epub 2008 Nov 18. Acta Crystallogr D Biol Crystallogr. 2008. PMID: 19018095 Free PMC article.

10

Identifying metabolic enzymes with multiple types of association evidence.

Kharchenko P, Chen L, Freund Y, Vitkup D, Church GM. Kharchenko P, et al. Among authors: freund y. BMC Bioinformatics. 2006 Mar 29;7:177. doi: 10.1186/1471-2105-7-177. BMC Bioinformatics. 2006. PMID: 16571130 Free PMC article.

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