Dennis S - Search Results

1

Impaired helix 12 dynamics due to proline 892 substitutions in the androgen receptor are associated with complete androgen insensitivity.

Elhaji YA, Stoica I, Dennis S, Purisima EO, Lumbroso R, Beitel LK, Trifiro MA. Elhaji YA, et al. Among authors: dennis s. Hum Mol Genet. 2006 Mar 15;15(6):921-31. doi: 10.1093/hmg/ddl009. Epub 2006 Jan 31. Hum Mol Genet. 2006. PMID: 16449235

2

Solvated interaction energy (SIE) for scoring protein-ligand binding affinities. 1. Exploring the parameter space.

Naïm M, Bhat S, Rankin KN, Dennis S, Chowdhury SF, Siddiqi I, Drabik P, Sulea T, Bayly CI, Jakalian A, Purisima EO. Naïm M, et al. Among authors: dennis s. J Chem Inf Model. 2007 Jan-Feb;47(1):122-33. doi: 10.1021/ci600406v. J Chem Inf Model. 2007. PMID: 17238257

3

Prediction of SAMPL-1 hydration free energies using a continuum electrostatics-dispersion model.

Sulea T, Wanapun D, Dennis S, Purisima EO. Sulea T, et al. Among authors: dennis s. J Phys Chem B. 2009 Apr 9;113(14):4511-20. doi: 10.1021/jp8061477. J Phys Chem B. 2009. PMID: 19267492

4

Improved mapping of protein binding sites.

Kortvelyesi T, Silberstein M, Dennis S, Vajda S. Kortvelyesi T, et al. Among authors: dennis s. J Comput Aided Mol Des. 2003 Feb-Apr;17(2-4):173-86. doi: 10.1023/a:1025369923311. J Comput Aided Mol Des. 2003. PMID: 13677484

5

Discrimination of near-native protein structures from misfolded models by empirical free energy functions.

Gatchell DW, Dennis S, Vajda S. Gatchell DW, et al. Among authors: dennis s. Proteins. 2000 Dec 1;41(4):518-34. Proteins. 2000. PMID: 11056039

6

Identification of substrate binding sites in enzymes by computational solvent mapping.

Silberstein M, Dennis S, Brown L, Kortvelyesi T, Clodfelter K, Vajda S. Silberstein M, et al. Among authors: dennis s. J Mol Biol. 2003 Oct 3;332(5):1095-113. doi: 10.1016/j.jmb.2003.08.019. J Mol Biol. 2003. PMID: 14499612

7

Computational mapping identifies the binding sites of organic solvents on proteins.

Dennis S, Kortvelyesi T, Vajda S. Dennis S, et al. Proc Natl Acad Sci U S A. 2002 Apr 2;99(7):4290-5. doi: 10.1073/pnas.062398499. Epub 2002 Mar 19. Proc Natl Acad Sci U S A. 2002. PMID: 11904374 Free PMC article.

8

Algorithms for computational solvent mapping of proteins.

Kortvelyesi T, Dennis S, Silberstein M, Brown L 3rd, Vajda S. Kortvelyesi T, et al. Among authors: dennis s. Proteins. 2003 May 15;51(3):340-51. doi: 10.1002/prot.10287. Proteins. 2003. PMID: 12696046

9

Continuum electrostatic analysis of preferred solvation sites around proteins in solution.

Dennis S, Camacho CJ, Vajda S. Dennis S, et al. Proteins. 2000 Feb 1;38(2):176-88. Proteins. 2000. PMID: 10656264

10

Semiglobal simplex optimization and its application to determining the preferred solvation sites of proteins.

Dennis S, Vajda S. Dennis S, et al. J Comput Chem. 2002 Feb;23(3):319-34. doi: 10.1002/jcc.10026. J Comput Chem. 2002. PMID: 11908495

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