Huynen MA - Search Results

1

Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment.

Ricard G, McEwan NR, Dutilh BE, Jouany JP, Macheboeuf D, Mitsumori M, McIntosh FM, Michalowski T, Nagamine T, Nelson N, Newbold CJ, Nsabimana E, Takenaka A, Thomas NA, Ushida K, Hackstein JH, Huynen MA. Ricard G, et al. Among authors: huynen ma. BMC Genomics. 2006 Feb 10;7:22. doi: 10.1186/1471-2164-7-22. BMC Genomics. 2006. PMID: 16472398 Free PMC article.

2

A hydrogenosomal [Fe]-hydrogenase from the anaerobic chytrid Neocallimastix sp. L2.

Voncken FG, Boxma B, van Hoek AH, Akhmanova AS, Vogels GD, Huynen M, Veenhuis M, Hackstein JH. Voncken FG, et al. Gene. 2002 Feb 6;284(1-2):103-12. doi: 10.1016/s0378-1119(02)00388-8. Gene. 2002. PMID: 11891051

3

Multiple origins of hydrogenosomes: functional and phylogenetic evidence from the ADP/ATP carrier of the anaerobic chytrid Neocallimastix sp.

Voncken F, Boxma B, Tjaden J, Akhmanova A, Huynen M, Verbeek F, Tielens AG, Haferkamp I, Neuhaus HE, Vogels G, Veenhuis M, Hackstein JH. Voncken F, et al. Mol Microbiol. 2002 Jun;44(6):1441-54. doi: 10.1046/j.1365-2958.2002.02959.x. Mol Microbiol. 2002. PMID: 12067335 Free article.

4

The anaerobic chytridiomycete fungus Piromyces sp. E2 produces ethanol via pyruvate:formate lyase and an alcohol dehydrogenase E.

Boxma B, Voncken F, Jannink S, van Alen T, Akhmanova A, van Weelden SW, van Hellemond JJ, Ricard G, Huynen M, Tielens AG, Hackstein JH. Boxma B, et al. Mol Microbiol. 2004 Mar;51(5):1389-99. doi: 10.1046/j.1365-2958.2003.03912.x. Mol Microbiol. 2004. PMID: 14982632 Free article.

5

A divergent ADP/ATP carrier in the hydrogenosomes of Trichomonas gallinae argues for an independent origin of these organelles.

Tjaden J, Haferkamp I, Boxma B, Tielens AG, Huynen M, Hackstein JH. Tjaden J, et al. Mol Microbiol. 2004 Mar;51(5):1439-46. doi: 10.1111/j.1365-2958.2004.03918.x. Mol Microbiol. 2004. PMID: 14982636 Free article.

6

The consistent phylogenetic signal in genome trees revealed by reducing the impact of noise.

Dutilh BE, Huynen MA, Bruno WJ, Snel B. Dutilh BE, et al. Among authors: huynen ma. J Mol Evol. 2004 May;58(5):527-39. doi: 10.1007/s00239-003-2575-6. J Mol Evol. 2004. PMID: 15170256

7

Evolutionary diversity of vertebrate small heat shock proteins.

Franck E, Madsen O, van Rheede T, Ricard G, Huynen MA, de Jong WW. Franck E, et al. Among authors: huynen ma. J Mol Evol. 2004 Dec;59(6):792-805. doi: 10.1007/s00239-004-0013-z. J Mol Evol. 2004. PMID: 15599511

8

An anaerobic mitochondrion that produces hydrogen.

Boxma B, de Graaf RM, van der Staay GW, van Alen TA, Ricard G, Gabaldón T, van Hoek AH, Moon-van der Staay SY, Koopman WJ, van Hellemond JJ, Tielens AG, Friedrich T, Veenhuis M, Huynen MA, Hackstein JH. Boxma B, et al. Among authors: huynen ma. Nature. 2005 Mar 3;434(7029):74-9. doi: 10.1038/nature03343. Nature. 2005. PMID: 15744302

9

Genome trees and the nature of genome evolution.

Snel B, Huynen MA, Dutilh BE. Snel B, et al. Among authors: huynen ma. Annu Rev Microbiol. 2005;59:191-209. doi: 10.1146/annurev.micro.59.030804.121233. Annu Rev Microbiol. 2005. PMID: 16153168 Review.

10

A global definition of expression context is conserved between orthologs, but does not correlate with sequence conservation.

Dutilh BE, Huynen MA, Snel B. Dutilh BE, et al. Among authors: huynen ma. BMC Genomics. 2006 Jan 19;7:10. doi: 10.1186/1471-2164-7-10. BMC Genomics. 2006. PMID: 16423292 Free PMC article.

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