Hubner IA - Search Results

1

Common motifs and topological effects in the protein folding transition state.

Hubner IA, Lindberg M, Haglund E, Oliveberg M, Shakhnovich EI. Hubner IA, et al. J Mol Biol. 2006 Jun 16;359(4):1075-85. doi: 10.1016/j.jmb.2006.04.015. Epub 2006 Apr 24. J Mol Biol. 2006. PMID: 16678203

2

Commitment and nucleation in the protein G transition state.

Hubner IA, Shimada J, Shakhnovich EI. Hubner IA, et al. J Mol Biol. 2004 Feb 20;336(3):745-61. doi: 10.1016/j.jmb.2003.12.032. J Mol Biol. 2004. PMID: 15095985

3

Simulation, experiment, and evolution: understanding nucleation in protein S6 folding.

Hubner IA, Oliveberg M, Shakhnovich EI. Hubner IA, et al. Proc Natl Acad Sci U S A. 2004 Jun 1;101(22):8354-9. doi: 10.1073/pnas.0401672101. Epub 2004 May 18. Proc Natl Acad Sci U S A. 2004. PMID: 15150413 Free PMC article.

4

Nucleation and the transition state of the SH3 domain.

Hubner IA, Edmonds KA, Shakhnovich EI. Hubner IA, et al. J Mol Biol. 2005 Jun 3;349(2):424-34. doi: 10.1016/j.jmb.2005.03.050. Epub 2005 Apr 13. J Mol Biol. 2005. PMID: 15890206

5

High-resolution protein folding with a transferable potential.

Hubner IA, Deeds EJ, Shakhnovich EI. Hubner IA, et al. Proc Natl Acad Sci U S A. 2005 Dec 27;102(52):18914-9. doi: 10.1073/pnas.0502181102. Epub 2005 Dec 19. Proc Natl Acad Sci U S A. 2005. PMID: 16365306 Free PMC article.

6

Understanding ensemble protein folding at atomic detail.

Hubner IA, Deeds EJ, Shakhnovich EI. Hubner IA, et al. Proc Natl Acad Sci U S A. 2006 Nov 21;103(47):17747-52. doi: 10.1073/pnas.0605580103. Epub 2006 Nov 9. Proc Natl Acad Sci U S A. 2006. PMID: 17095606 Free PMC article.

7

CoC: a database of universally conserved residues in protein folds.

Donald JE, Hubner IA, Rotemberg VM, Shakhnovich EI, Mirny LA. Donald JE, et al. Among authors: hubner ia. Bioinformatics. 2005 May 15;21(10):2539-40. doi: 10.1093/bioinformatics/bti360. Epub 2005 Mar 3. Bioinformatics. 2005. PMID: 15746286

8

Geometric and physical considerations for realistic protein models.

Hubner IA, Shakhnovich EI. Hubner IA, et al. Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Aug;72(2 Pt 1):022901. doi: 10.1103/PhysRevE.72.022901. Epub 2005 Aug 17. Phys Rev E Stat Nonlin Soft Matter Phys. 2005. PMID: 16196617

9

Identification of the minimal protein-folding nucleus through loop-entropy perturbations.

Lindberg MO, Haglund E, Hubner IA, Shakhnovich EI, Oliveberg M. Lindberg MO, et al. Among authors: hubner ia. Proc Natl Acad Sci U S A. 2006 Mar 14;103(11):4083-8. doi: 10.1073/pnas.0508863103. Epub 2006 Feb 27. Proc Natl Acad Sci U S A. 2006. PMID: 16505376 Free PMC article.

10

On the origin and highly likely completeness of single-domain protein structures.

Zhang Y, Hubner IA, Arakaki AK, Shakhnovich E, Skolnick J. Zhang Y, et al. Among authors: hubner ia. Proc Natl Acad Sci U S A. 2006 Feb 21;103(8):2605-10. doi: 10.1073/pnas.0509379103. Epub 2006 Feb 14. Proc Natl Acad Sci U S A. 2006. PMID: 16478803 Free PMC article.

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