Liao JC - Search Results

1

Versatility and connectivity efficiency of bipartite transcription networks.

Brynildsen MP, Tran LM, Liao JC. Brynildsen MP, et al. Among authors: liao jc. Biophys J. 2006 Oct 15;91(8):2749-59. doi: 10.1529/biophysj.106.082560. Epub 2006 Jun 30. Biophys J. 2006. PMID: 16815895 Free PMC article.

2

gNCA: a framework for determining transcription factor activity based on transcriptome: identifiability and numerical implementation.

Tran LM, Brynildsen MP, Kao KC, Suen JK, Liao JC. Tran LM, et al. Among authors: liao jc. Metab Eng. 2005 Mar;7(2):128-41. doi: 10.1016/j.ymben.2004.12.001. Metab Eng. 2005. PMID: 15781421

3

Inferring yeast cell cycle regulators and interactions using transcription factor activities.

Yang YL, Suen J, Brynildsen MP, Galbraith SJ, Liao JC. Yang YL, et al. Among authors: liao jc. BMC Genomics. 2005 Jun 10;6:90. doi: 10.1186/1471-2164-6-90. BMC Genomics. 2005. PMID: 15949038 Free PMC article.

4

Transcriptome network component analysis with limited microarray data.

Galbraith SJ, Tran LM, Liao JC. Galbraith SJ, et al. Among authors: liao jc. Bioinformatics. 2006 Aug 1;22(15):1886-94. doi: 10.1093/bioinformatics/btl279. Epub 2006 Jun 9. Bioinformatics. 2006. PMID: 16766556

5

A Gibbs sampler for the identification of gene expression and network connectivity consistency.

Brynildsen MP, Tran LM, Liao JC. Brynildsen MP, et al. Among authors: liao jc. Bioinformatics. 2006 Dec 15;22(24):3040-6. doi: 10.1093/bioinformatics/btl541. Epub 2006 Oct 23. Bioinformatics. 2006. PMID: 17060361

6

Biological network mapping and source signal deduction.

Brynildsen MP, Wu TY, Jang SS, Liao JC. Brynildsen MP, et al. Among authors: liao jc. Bioinformatics. 2007 Jul 15;23(14):1783-91. doi: 10.1093/bioinformatics/btm246. Epub 2007 May 11. Bioinformatics. 2007. PMID: 17495996

7

Ensemble modeling of metabolic networks.

Tran LM, Rizk ML, Liao JC. Tran LM, et al. Among authors: liao jc. Biophys J. 2008 Dec 15;95(12):5606-17. doi: 10.1529/biophysj.108.135442. Epub 2008 Sep 26. Biophys J. 2008. PMID: 18820235 Free PMC article.

8

An integrated network approach identifies the isobutanol response network of Escherichia coli.

Brynildsen MP, Liao JC. Brynildsen MP, et al. Among authors: liao jc. Mol Syst Biol. 2009;5:277. doi: 10.1038/msb.2009.34. Epub 2009 Jun 16. Mol Syst Biol. 2009. PMID: 19536200 Free PMC article.

9

Trimming of mammalian transcriptional networks using network component analysis.

Tran LM, Hyduke DR, Liao JC. Tran LM, et al. Among authors: liao jc. BMC Bioinformatics. 2010 Oct 13;11:511. doi: 10.1186/1471-2105-11-511. BMC Bioinformatics. 2010. PMID: 20942926 Free PMC article.

10

Network component analysis: reconstruction of regulatory signals in biological systems.

Liao JC, Boscolo R, Yang YL, Tran LM, Sabatti C, Roychowdhury VP. Liao JC, et al. Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15522-7. doi: 10.1073/pnas.2136632100. Epub 2003 Dec 12. Proc Natl Acad Sci U S A. 2003. PMID: 14673099 Free PMC article.

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