Jackson RM - Search Results

1

Identification of the REST regulon reveals extensive transposable element-mediated binding site duplication.

Johnson R, Gamblin RJ, Ooi L, Bruce AW, Donaldson IJ, Westhead DR, Wood IC, Jackson RM, Buckley NJ. Johnson R, et al. Among authors: jackson rm. Nucleic Acids Res. 2006;34(14):3862-77. doi: 10.1093/nar/gkl525. Epub 2006 Aug 9. Nucleic Acids Res. 2006. PMID: 16899447 Free PMC article.

2

Ligand binding: functional site location, similarity and docking.

Campbell SJ, Gold ND, Jackson RM, Westhead DR. Campbell SJ, et al. Among authors: jackson rm. Curr Opin Struct Biol. 2003 Jun;13(3):389-95. doi: 10.1016/s0959-440x(03)00075-7. Curr Opin Struct Biol. 2003. PMID: 12831892 Review.

3

SitesBase: a database for structure-based protein-ligand binding site comparisons.

Gold ND, Jackson RM. Gold ND, et al. Among authors: jackson rm. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D231-4. doi: 10.1093/nar/gkj062. Nucleic Acids Res. 2006. PMID: 16381853 Free PMC article.

4

Binding site similarity analysis for the functional classification of the protein kinase family.

Kinnings SL, Jackson RM. Kinnings SL, et al. Among authors: jackson rm. J Chem Inf Model. 2009 Feb;49(2):318-29. doi: 10.1021/ci800289y. J Chem Inf Model. 2009. PMID: 19434833

5

The Poisson Index: a new probabilistic model for protein ligand binding site similarity.

Davies JR, Jackson RM, Mardia KV, Taylor CC. Davies JR, et al. Among authors: jackson rm. Bioinformatics. 2007 Nov 15;23(22):3001-8. doi: 10.1093/bioinformatics/btm470. Epub 2007 Sep 24. Bioinformatics. 2007. PMID: 17893083

6

Methods for the prediction of protein-ligand binding sites for structure-based drug design and virtual ligand screening.

Laurie AT, Jackson RM. Laurie AT, et al. Among authors: jackson rm. Curr Protein Pept Sci. 2006 Oct;7(5):395-406. doi: 10.2174/138920306778559386. Curr Protein Pept Sci. 2006. PMID: 17073692 Review.

7

Predicting druggable binding sites at the protein-protein interface.

Fuller JC, Burgoyne NJ, Jackson RM. Fuller JC, et al. Among authors: jackson rm. Drug Discov Today. 2009 Feb;14(3-4):155-61. doi: 10.1016/j.drudis.2008.10.009. Epub 2008 Dec 16. Drug Discov Today. 2009. PMID: 19041415 Review.

8

New opportunities for protease ligand-binding site comparisons using SitesBase.

Gold ND, Deville K, Jackson RM. Gold ND, et al. Among authors: jackson rm. Biochem Soc Trans. 2007 Jun;35(Pt 3):561-5. doi: 10.1042/BST0350561. Biochem Soc Trans. 2007. PMID: 17511652

9

Further studies on hepatitis C virus NS5A-SH3 domain interactions: identification of residues critical for binding and implications for viral RNA replication and modulation of cell signalling.

Macdonald A, Mazaleyrat S, McCormick C, Street A, Burgoyne NJ, Jackson RM, Cazeaux V, Shelton H, Saksela K, Harris M. Macdonald A, et al. Among authors: jackson rm. J Gen Virol. 2005 Apr;86(Pt 4):1035-1044. doi: 10.1099/vir.0.80734-0. J Gen Virol. 2005. PMID: 15784897

10

InCa-SiteFinder: a method for structure-based prediction of inositol and carbohydrate binding sites on proteins.

Kulharia M, Bridgett SJ, Goody RS, Jackson RM. Kulharia M, et al. Among authors: jackson rm. J Mol Graph Model. 2009 Oct;28(3):297-303. doi: 10.1016/j.jmgm.2009.08.009. Epub 2009 Aug 27. J Mol Graph Model. 2009. PMID: 19762259

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