Zoete V - Search Results

1

Importance of individual side chains for the stability of a protein fold: computational alanine scanning of the insulin monomer.

Zoete V, Meuwly M. Zoete V, et al. J Comput Chem. 2006 Nov 30;27(15):1843-57. doi: 10.1002/jcc.20512. J Comput Chem. 2006. PMID: 16981237

2

Investigation of glucose binding sites on insulin.

Zoete V, Meuwly M, Karplus M. Zoete V, et al. Proteins. 2004 May 15;55(3):568-81. doi: 10.1002/prot.20071. Proteins. 2004. PMID: 15103621

3

On the influence of semirigid environments on proton transfer along molecular chains.

Zoete V, Meuwly M. Zoete V, et al. J Chem Phys. 2004 Apr 15;120(15):7085-94. doi: 10.1063/1.1643721. J Chem Phys. 2004. PMID: 15267612

4

Double proton transfer in the isolated and DNA-embedded guanine-cytosine base pair.

Zoete V, Meuwly M. Zoete V, et al. J Chem Phys. 2004 Sep 1;121(9):4377-88. doi: 10.1063/1.1774152. J Chem Phys. 2004. PMID: 15332989

5

A comparison of the dynamic behavior of monomeric and dimeric insulin shows structural rearrangements in the active monomer.

Zoete V, Meuwly M, Karplus M. Zoete V, et al. J Mol Biol. 2004 Sep 17;342(3):913-29. doi: 10.1016/j.jmb.2004.07.033. J Mol Biol. 2004. PMID: 15342246

6

Study of the insulin dimerization: binding free energy calculations and per-residue free energy decomposition.

Zoete V, Meuwly M, Karplus M. Zoete V, et al. Proteins. 2005 Oct 1;61(1):79-93. doi: 10.1002/prot.20528. Proteins. 2005. PMID: 16080143

7

How inaccuracies in protein structure models affect estimates of protein-ligand interactions: computational analysis of HIV-I protease inhibitor binding.

Thorsteinsdottir HB, Schwede T, Zoete V, Meuwly M. Thorsteinsdottir HB, et al. Among authors: zoete v. Proteins. 2006 Nov 1;65(2):407-23. doi: 10.1002/prot.21096. Proteins. 2006. PMID: 16941468

8

Combined simulation and mutagenesis analyses reveal the involvement of key residues for peroxisome proliferator-activated receptor alpha helix 12 dynamic behavior.

Michalik L, Zoete V, Krey G, Grosdidier A, Gelman L, Chodanowski P, Feige JN, Desvergne B, Wahli W, Michielin O. Michalik L, et al. Among authors: zoete v. J Biol Chem. 2007 Mar 30;282(13):9666-9677. doi: 10.1074/jbc.M610523200. Epub 2007 Jan 2. J Biol Chem. 2007. PMID: 17200111 Free article.

9

Comparison between computational alanine scanning and per-residue binding free energy decomposition for protein-protein association using MM-GBSA: application to the TCR-p-MHC complex.

Zoete V, Michielin O. Zoete V, et al. Proteins. 2007 Jun 1;67(4):1026-47. doi: 10.1002/prot.21395. Proteins. 2007. PMID: 17377991

10

Insulin: a model system for nanomedicine?

Koch M, Schmid FF, Zoete V, Meuwly M. Koch M, et al. Among authors: zoete v. Nanomedicine (Lond). 2006 Oct;1(3):373-8. doi: 10.2217/17435889.1.3.373. Nanomedicine (Lond). 2006. PMID: 17716170 Review.

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