Scholten JC - Search Results

1

LC-MS/MS based proteomic analysis and functional inference of hypothetical proteins in Desulfovibrio vulgaris.

Zhang W, Culley DE, Gritsenko MA, Moore RJ, Nie L, Scholten JC, Petritis K, Strittmatter EF, Camp DG 2nd, Smith RD, Brockman FJ. Zhang W, et al. Among authors: scholten jc. Biochem Biophys Res Commun. 2006 Nov 3;349(4):1412-9. doi: 10.1016/j.bbrc.2006.09.019. Epub 2006 Sep 15. Biochem Biophys Res Commun. 2006. PMID: 16982031

2

Evolution of the syntrophic interaction between Desulfovibrio vulgaris and Methanosarcina barkeri: Involvement of an ancient horizontal gene transfer.

Scholten JC, Culley DE, Brockman FJ, Wu G, Zhang W. Scholten JC, et al. Biochem Biophys Res Commun. 2007 Jan 5;352(1):48-54. doi: 10.1016/j.bbrc.2006.10.164. Epub 2006 Nov 7. Biochem Biophys Res Commun. 2007. PMID: 17107661

3

Global transcriptomic analysis of Desulfovibrio vulgaris on different electron donors.

Zhang W, Culley DE, Scholten JC, Hogan M, Vitiritti L, Brockman FJ. Zhang W, et al. Among authors: scholten jc. Antonie Van Leeuwenhoek. 2006 Feb;89(2):221-37. doi: 10.1007/s10482-005-9024-z. Epub 2006 May 5. Antonie Van Leeuwenhoek. 2006. PMID: 16710634

4

Development and assessment of whole-genome oligonucleotide microarrays to analyze an anaerobic microbial community and its responses to oxidative stress.

Scholten JC, Culley DE, Nie L, Munn KJ, Chow L, Brockman FJ, Zhang W. Scholten JC, et al. Biochem Biophys Res Commun. 2007 Jun 29;358(2):571-7. doi: 10.1016/j.bbrc.2007.04.160. Epub 2007 May 4. Biochem Biophys Res Commun. 2007. PMID: 17498652

5

Comparative transcriptome analysis of Desulfovibrio vulgaris grown in planktonic culture and mature biofilm on a steel surface.

Zhang W, Culley DE, Nie L, Scholten JC. Zhang W, et al. Among authors: scholten jc. Appl Microbiol Biotechnol. 2007 Aug;76(2):447-57. doi: 10.1007/s00253-007-1014-9. Epub 2007 Jun 15. Appl Microbiol Biotechnol. 2007. PMID: 17571259

6

Global transcriptomics analysis of the Desulfovibrio vulgaris change from syntrophic growth with Methanosarcina barkeri to sulfidogenic metabolism.

Plugge CM, Scholten JCM, Culley DE, Nie L, Brockman FJ, Zhang W. Plugge CM, et al. Among authors: scholten jcm. Microbiology (Reading). 2010 Sep;156(Pt 9):2746-2756. doi: 10.1099/mic.0.038539-0. Epub 2010 Jun 24. Microbiology (Reading). 2010. PMID: 20576691 Free article.

7

Microbial dynamics in upflow anaerobic sludge blanket (UASB) bioreactor granules in response to short-term changes in substrate feed.

Kovacik WP, Scholten JCM, Culley D, Hickey R, Zhang W, Brockman FJ. Kovacik WP, et al. Among authors: scholten jcm. Microbiology (Reading). 2010 Aug;156(Pt 8):2418-2427. doi: 10.1099/mic.0.036715-0. Epub 2010 Apr 29. Microbiology (Reading). 2010. PMID: 20430810 Free article.

8

Integrative analysis of transcriptomic and proteomic data: challenges, solutions and applications.

Nie L, Wu G, Culley DE, Scholten JC, Zhang W. Nie L, et al. Among authors: scholten jc. Crit Rev Biotechnol. 2007 Apr-Jun;27(2):63-75. doi: 10.1080/07388550701334212. Crit Rev Biotechnol. 2007. PMID: 17578703 Review.

9

Modeling methanogenesis with a genome-scale metabolic reconstruction of Methanosarcina barkeri.

Feist AM, Scholten JC, Palsson BØ, Brockman FJ, Ideker T. Feist AM, et al. Among authors: scholten jc. Mol Syst Biol. 2006;2:2006.0004. doi: 10.1038/msb4100046. Epub 2006 Jan 31. Mol Syst Biol. 2006. PMID: 16738551 Free PMC article.

10

Metabolic flexibility of sulfate-reducing bacteria.

Plugge CM, Zhang W, Scholten JC, Stams AJ. Plugge CM, et al. Among authors: scholten jc. Front Microbiol. 2011 May 2;2:81. doi: 10.3389/fmicb.2011.00081. eCollection 2011. Front Microbiol. 2011. PMID: 21734907 Free PMC article.

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