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MMDB: annotating protein sequences with Entrez's 3D-structure database.
Wang Y, Addess KJ, Chen J, Geer LY, He J, He S, Lu S, Madej T, Marchler-Bauer A, Thiessen PA, Zhang N, Bryant SH. Wang Y, et al. Nucleic Acids Res. 2007 Jan;35(Database issue):D298-300. doi: 10.1093/nar/gkl952. Epub 2006 Nov 29. Nucleic Acids Res. 2007. PMID: 17135201 Free PMC article.
A measure of success in fold recognition.
Marchler-Bauer A, Bryant SH. Marchler-Bauer A, et al. Trends Biochem Sci. 1997 Jul;22(7):236-40. doi: 10.1016/s0968-0004(97)01078-5. Trends Biochem Sci. 1997. PMID: 9255062 Review.
Measures of threading specificity and accuracy.
Marchler-Bauer A, Bryant SH. Marchler-Bauer A, et al. Proteins. 1997;Suppl 1:74-82. doi: 10.1002/(sici)1097-0134(1997)1+<74::aid-prot11>3.3.co;2-3. Proteins. 1997. PMID: 9485498
MMDB: Entrez's 3D structure database.
Marchler-Bauer A, Addess KJ, Chappey C, Geer L, Madej T, Matsuo Y, Wang Y, Bryant SH. Marchler-Bauer A, et al. Nucleic Acids Res. 1999 Jan 1;27(1):240-3. doi: 10.1093/nar/27.1.240. Nucleic Acids Res. 1999. PMID: 9847190 Free PMC article.
A measure of progress in fold recognition?
Marchler-Bauer A, Bryant SH. Marchler-Bauer A, et al. Proteins. 1999;Suppl 3:218-25. doi: 10.1002/(sici)1097-0134(1999)37:3+<218::aid-prot28>3.3.co;2-o. Proteins. 1999. PMID: 10526372
MMDB: 3D structure data in Entrez.
Wang Y, Addess KJ, Geer L, Madej T, Marchler-Bauer A, Zimmerman D, Bryant SH. Wang Y, et al. Nucleic Acids Res. 2000 Jan 1;28(1):243-5. doi: 10.1093/nar/28.1.243. Nucleic Acids Res. 2000. PMID: 10592236 Free PMC article.
75 results