Friesner RA - Search Results

1

Assignment of polar states for protein amino acid residues using an interaction cluster decomposition algorithm and its application to high resolution protein structure modeling.

Li X, Jacobson MP, Zhu K, Zhao S, Friesner RA. Li X, et al. Among authors: friesner ra. Proteins. 2007 Mar 1;66(4):824-37. doi: 10.1002/prot.21125. Proteins. 2007. PMID: 17154422

2

An algorithm to generate low-resolution protein tertiary structures from knowledge of secondary structure.

Monge A, Friesner RA, Honig B. Monge A, et al. Among authors: friesner ra. Proc Natl Acad Sci U S A. 1994 May 24;91(11):5027-9. doi: 10.1073/pnas.91.11.5027. Proc Natl Acad Sci U S A. 1994. PMID: 8197177 Free PMC article.

3

Tertiary structure prediction of mixed alpha/beta proteins via energy minimization.

Standley DM, Gunn JR, Friesner RA, McDermott AE. Standley DM, et al. Among authors: friesner ra. Proteins. 1998 Nov 1;33(2):240-52. Proteins. 1998. PMID: 9779791

4

Protein tertiary structure prediction using a branch and bound algorithm.

Eyrich VA, Standley DM, Felts AK, Friesner RA. Eyrich VA, et al. Among authors: friesner ra. Proteins. 1999 Apr 1;35(1):41-57. Proteins. 1999. PMID: 10090285

5

Prediction of loop geometries using a generalized born model of solvation effects.

Rapp CS, Friesner RA. Rapp CS, et al. Among authors: friesner ra. Proteins. 1999 May 1;35(2):173-83. Proteins. 1999. PMID: 10223290

6

Prediction of protein tertiary structure to low resolution: performance for a large and structurally diverse test set.

Eyrich VA, Standley DM, Friesner RA. Eyrich VA, et al. Among authors: friesner ra. J Mol Biol. 1999 May 14;288(4):725-42. doi: 10.1006/jmbi.1999.2702. J Mol Biol. 1999. PMID: 10329175 Free article.

7

On the role of the crystal environment in determining protein side-chain conformations.

Jacobson MP, Friesner RA, Xiang Z, Honig B. Jacobson MP, et al. Among authors: friesner ra. J Mol Biol. 2002 Jul 12;320(3):597-608. doi: 10.1016/s0022-2836(02)00470-9. J Mol Biol. 2002. PMID: 12096912

8

A novel fold recognition method using composite predicted secondary structures.

An Y, Friesner RA. An Y, et al. Among authors: friesner ra. Proteins. 2002 Aug 1;48(2):352-66. doi: 10.1002/prot.10145. Proteins. 2002. PMID: 12112702

9

Complete protein structure determination using backbone residual dipolar couplings and sidechain rotamer prediction.

Andrec M, Harano Y, Jacobson MP, Friesner RA, Levy RM. Andrec M, et al. Among authors: friesner ra. J Struct Funct Genomics. 2002;2(2):103-11. doi: 10.1023/a:1020435630054. J Struct Funct Genomics. 2002. PMID: 12836667

10

A hierarchical approach to all-atom protein loop prediction.

Jacobson MP, Pincus DL, Rapp CS, Day TJ, Honig B, Shaw DE, Friesner RA. Jacobson MP, et al. Among authors: friesner ra. Proteins. 2004 May 1;55(2):351-67. doi: 10.1002/prot.10613. Proteins. 2004. PMID: 15048827

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