Li Y - Search Results

1

Phylogenetic profiles for the prediction of protein-protein interactions: how to select reference organisms?

Sun J, Li Y, Zhao Z. Sun J, et al. Among authors: li y. Biochem Biophys Res Commun. 2007 Feb 23;353(4):985-91. doi: 10.1016/j.bbrc.2006.12.146. Epub 2006 Dec 27. Biochem Biophys Res Commun. 2007. PMID: 17207465

2

InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes.

Sun J, Sun Y, Ding G, Liu Q, Wang C, He Y, Shi T, Li Y, Zhao Z. Sun J, et al. Among authors: li y. BMC Bioinformatics. 2007 Oct 26;8:414. doi: 10.1186/1471-2105-8-414. BMC Bioinformatics. 2007. PMID: 17963500 Free PMC article.

3

Refined phylogenetic profiles method for predicting protein-protein interactions.

Sun J, Xu J, Liu Z, Liu Q, Zhao A, Shi T, Li Y. Sun J, et al. Among authors: li y. Bioinformatics. 2005 Aug 15;21(16):3409-15. doi: 10.1093/bioinformatics/bti532. Epub 2005 Jun 9. Bioinformatics. 2005. PMID: 15947018

4

Construction of a chloroplast protein interaction network and functional mining of photosynthetic proteins in Arabidopsis thaliana.

Yu QB, Li G, Wang G, Sun JC, Wang PC, Wang C, Mi HL, Ma WM, Cui J, Cui YL, Chong K, Li YX, Li YH, Zhao Z, Shi TL, Yang ZN. Yu QB, et al. Cell Res. 2008 Oct;18(10):1007-19. doi: 10.1038/cr.2008.286. Cell Res. 2008. PMID: 18813226

5

Multiple transcription factors contribute to inter-chromosomal interaction in yeast.

Dai Y, Li C, Pei G, Dong X, Ding G, Zhao Z, Li Y, Jia P. Dai Y, et al. Among authors: li c, li y. BMC Syst Biol. 2018 Dec 21;12(Suppl 8):140. doi: 10.1186/s12918-018-0643-1. BMC Syst Biol. 2018. PMID: 30577873 Free PMC article.

6

DCGL v2.0: an R package for unveiling differential regulation from differential co-expression.

Yang J, Yu H, Liu BH, Zhao Z, Liu L, Ma LX, Li YX, Li YY. Yang J, et al. PLoS One. 2013 Nov 20;8(11):e79729. doi: 10.1371/journal.pone.0079729. eCollection 2013. PLoS One. 2013. PMID: 24278165 Free PMC article.

7

Predicting the protein SUMO modification sites based on Properties Sequential Forward Selection (PSFS).

Liu B, Li S, Wang Y, Lu L, Li Y, Cai Y. Liu B, et al. Among authors: li s, li y. Biochem Biophys Res Commun. 2007 Jun 22;358(1):136-9. doi: 10.1016/j.bbrc.2007.04.097. Epub 2007 Apr 23. Biochem Biophys Res Commun. 2007. PMID: 17470363

8

Prediction of subcellular protein localization based on functional domain composition.

Jia P, Qian Z, Zeng Z, Cai Y, Li Y. Jia P, et al. Among authors: li y. Biochem Biophys Res Commun. 2007 Jun 1;357(2):366-70. doi: 10.1016/j.bbrc.2007.03.139. Epub 2007 Apr 2. Biochem Biophys Res Commun. 2007. PMID: 17428441

9

A novel computational method to predict transcription factor DNA binding preference.

Qian Z, Cai YD, Li Y. Qian Z, et al. Among authors: li y. Biochem Biophys Res Commun. 2006 Sep 29;348(3):1034-7. doi: 10.1016/j.bbrc.2006.07.149. Epub 2006 Aug 1. Biochem Biophys Res Commun. 2006. PMID: 16899225

10

Automatic transcription factor classifier based on functional domain composition.

Qian Z, Cai YD, Li Y. Qian Z, et al. Among authors: li y. Biochem Biophys Res Commun. 2006 Aug 18;347(1):141-4. doi: 10.1016/j.bbrc.2006.06.060. Epub 2006 Jun 21. Biochem Biophys Res Commun. 2006. PMID: 16808896

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