Holst MJ - Search Results

1

Finite element analysis of the time-dependent Smoluchowski equation for acetylcholinesterase reaction rate calculations.

Cheng Y, Suen JK, Zhang D, Bond SD, Zhang Y, Song Y, Baker NA, Bajaj CL, Holst MJ, McCammon JA. Cheng Y, et al. Among authors: holst mj. Biophys J. 2007 May 15;92(10):3397-406. doi: 10.1529/biophysj.106.102533. Epub 2007 Feb 16. Biophys J. 2007. PMID: 17307827 Free PMC article.

2

An Open-Source Mesh Generation Platform for Biophysical Modeling Using Realistic Cellular Geometries.

Lee CT, Laughlin JG, Moody JB, Amaro RE, McCammon JA, Holst M, Rangamani P. Lee CT, et al. Biophys J. 2020 Mar 10;118(5):1003-1008. doi: 10.1016/j.bpj.2019.11.3400. Epub 2020 Jan 22. Biophys J. 2020. PMID: 32032503 Free PMC article.

3

Tetrameric mouse acetylcholinesterase: continuum diffusion rate calculations by solving the steady-state Smoluchowski equation using finite element methods.

Zhang D, Suen J, Zhang Y, Song Y, Radic Z, Taylor P, Holst MJ, Bajaj C, Baker NA, McCammon JA. Zhang D, et al. Among authors: holst mj. Biophys J. 2005 Mar;88(3):1659-65. doi: 10.1529/biophysj.104.053850. Epub 2004 Dec 30. Biophys J. 2005. PMID: 15626705 Free PMC article.

4

Continuum simulations of acetylcholine diffusion with reaction-determined boundaries in neuromuscular junction models.

Cheng Y, Suen JK, Radić Z, Bond SD, Holst MJ, McCammon JA. Cheng Y, et al. Among authors: holst mj. Biophys Chem. 2007 May;127(3):129-39. doi: 10.1016/j.bpc.2007.01.003. Epub 2007 Jan 19. Biophys Chem. 2007. PMID: 17307283 Free PMC article.

5

Electrodiffusion: a continuum modeling framework for biomolecular systems with realistic spatiotemporal resolution.

Lu B, Zhou YC, Huber GA, Bond SD, Holst MJ, McCammon JA. Lu B, et al. Among authors: holst mj. J Chem Phys. 2007 Oct 7;127(13):135102. doi: 10.1063/1.2775933. J Chem Phys. 2007. PMID: 17919055 Free article.

6

Continuum simulations of acetylcholine consumption by acetylcholinesterase: a Poisson-Nernst-Planck approach.

Zhou YC, Lu B, Huber GA, Holst MJ, McCammon JA. Zhou YC, et al. Among authors: holst mj. J Phys Chem B. 2008 Jan 17;112(2):270-5. doi: 10.1021/jp074900e. Epub 2007 Dec 5. J Phys Chem B. 2008. PMID: 18052268

7

Diffusional channeling in the sulfate-activating complex: combined continuum modeling and coarse-grained brownian dynamics studies.

Cheng Y, Chang CE, Yu Z, Zhang Y, Sun M, Leyh TS, Holst MJ, McCammon JA. Cheng Y, et al. Among authors: holst mj. Biophys J. 2008 Nov 15;95(10):4659-67. doi: 10.1529/biophysj.108.140038. Epub 2008 Aug 8. Biophys J. 2008. PMID: 18689458 Free PMC article.

8

Finite element analysis of drug electrostatic diffusion: inhibition rate studies in N1 neuraminidase.

Cheng Y, Holst MJ, McCammon JA. Cheng Y, et al. Among authors: holst mj. Pac Symp Biocomput. 2009:281-92. doi: 10.1142/9789812836939_0027. Pac Symp Biocomput. 2009. PMID: 19209708 Free PMC article.

9

Finite element simulations of acetylcholine diffusion in neuromuscular junctions.

Tai K, Bond SD, MacMillan HR, Baker NA, Holst MJ, McCammon JA. Tai K, et al. Among authors: holst mj. Biophys J. 2003 Apr;84(4):2234-41. doi: 10.1016/S0006-3495(03)75029-2. Biophys J. 2003. PMID: 12668432 Free PMC article.

10

ADAPTIVE FINITE ELEMENT MODELING TECHNIQUES FOR THE POISSON-BOLTZMANN EQUATION.

Holst M, McCammon JA, Yu Z, Zhou Y, Zhu Y. Holst M, et al. Commun Comput Phys. 2012;11(1):179-214. doi: 10.4208/cicp.081009.130611a. Commun Comput Phys. 2012. PMID: 21949541 Free PMC article.

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