Ye K - Search Results

1

Transcriptional signature with differential expression of BCL6 target genes accurately identifies BCL6-dependent diffuse large B cell lymphomas.

Polo JM, Juszczynski P, Monti S, Cerchietti L, Ye K, Greally JM, Shipp M, Melnick A. Polo JM, et al. Among authors: ye k. Proc Natl Acad Sci U S A. 2007 Feb 27;104(9):3207-12. doi: 10.1073/pnas.0611399104. Epub 2007 Feb 20. Proc Natl Acad Sci U S A. 2007. PMID: 17360630 Free PMC article.

2

Comparative isoschizomer profiling of cytosine methylation: the HELP assay.

Khulan B, Thompson RF, Ye K, Fazzari MJ, Suzuki M, Stasiek E, Figueroa ME, Glass JL, Chen Q, Montagna C, Hatchwell E, Selzer RR, Richmond TA, Green RD, Melnick A, Greally JM. Khulan B, et al. Among authors: ye k. Genome Res. 2006 Aug;16(8):1046-55. doi: 10.1101/gr.5273806. Epub 2006 Jun 29. Genome Res. 2006. PMID: 16809668 Free PMC article.

3

An integrative genomic and epigenomic approach for the study of transcriptional regulation.

Figueroa ME, Reimers M, Thompson RF, Ye K, Li Y, Selzer RR, Fridriksson J, Paietta E, Wiernik P, Green RD, Greally JM, Melnick A. Figueroa ME, et al. Among authors: ye k. PLoS One. 2008 Mar 26;3(3):e1882. doi: 10.1371/journal.pone.0001882. PLoS One. 2008. PMID: 18365023 Free PMC article.

4

Meta-analysis of microarray studies reveals a novel hematopoietic progenitor cell signature and demonstrates feasibility of inter-platform data integration.

Sohal D, Yeatts A, Ye K, Pellagatti A, Zhou L, Pahanish P, Mo Y, Bhagat T, Mariadason J, Boultwood J, Melnick A, Greally J, Verma A. Sohal D, et al. Among authors: ye k. PLoS One. 2008 Aug 13;3(8):e2965. doi: 10.1371/journal.pone.0002965. PLoS One. 2008. PMID: 18698424 Free PMC article.

5

The BCL6 transcriptional program features repression of multiple oncogenes in primary B cells and is deregulated in DLBCL.

Ci W, Polo JM, Cerchietti L, Shaknovich R, Wang L, Yang SN, Ye K, Farinha P, Horsman DE, Gascoyne RD, Elemento O, Melnick A. Ci W, et al. Among authors: ye k. Blood. 2009 May 28;113(22):5536-48. doi: 10.1182/blood-2008-12-193037. Epub 2009 Mar 23. Blood. 2009. PMID: 19307668 Free PMC article.

6

Genome-wide analysis of DNA binding and transcriptional regulation by the mammalian Doublesex homolog DMRT1 in the juvenile testis.

Murphy MW, Sarver AL, Rice D, Hatzi K, Ye K, Melnick A, Heckert LL, Zarkower D, Bardwell VJ. Murphy MW, et al. Among authors: ye k. Proc Natl Acad Sci U S A. 2010 Jul 27;107(30):13360-5. doi: 10.1073/pnas.1006243107. Epub 2010 Jul 7. Proc Natl Acad Sci U S A. 2010. PMID: 20616082 Free PMC article.

7

Detecting, quantifying, and discriminating the mechanism of mosaic chromosomal aneuploidies using MAD-seq.

Kong Y, Berko ER, Marcketta A, Maqbool SB, Simões-Pires CA, Kronn DF, Ye KQ, Suzuki M, Auton A, Greally JM. Kong Y, et al. Genome Res. 2018 Jul;28(7):1039-1052. doi: 10.1101/gr.226282.117. Epub 2018 May 17. Genome Res. 2018. PMID: 29773658 Free PMC article.

8

Analysis of polymorphisms in AT-rich domains of neuregulin 1 gene in schizophrenia.

Lachman HM, Pedrosa E, Nolan KA, Glass M, Ye K, Saito T. Lachman HM, et al. Among authors: ye k. Am J Med Genet B Neuropsychiatr Genet. 2006 Jan 5;141B(1):102-9. doi: 10.1002/ajmg.b.30242. Am J Med Genet B Neuropsychiatr Genet. 2006. PMID: 16287046

9

Positive association of schizophrenia to JARID2 gene.

Pedrosa E, Ye K, Nolan KA, Morrell L, Okun JM, Persky AD, Saito T, Lachman HM. Pedrosa E, et al. Among authors: ye k. Am J Med Genet B Neuropsychiatr Genet. 2007 Jan 5;144B(1):45-51. doi: 10.1002/ajmg.b.30386. Am J Med Genet B Neuropsychiatr Genet. 2007. PMID: 16967465

10

Gene size matters.

Mirina A, Atzmon G, Ye K, Bergman A. Mirina A, et al. Among authors: ye k. PLoS One. 2012;7(11):e49093. doi: 10.1371/journal.pone.0049093. Epub 2012 Nov 9. PLoS One. 2012. PMID: 23152854 Free PMC article.

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