Abagyan R - Search Results

1

Discovery of novel inhibitors targeting enoyl-acyl carrier protein reductase in Plasmodium falciparum by structure-based virtual screening.

Nicola G, Smith CA, Lucumi E, Kuo MR, Karagyozov L, Fidock DA, Sacchettini JC, Abagyan R. Nicola G, et al. Among authors: abagyan r. Biochem Biophys Res Commun. 2007 Jul 6;358(3):686-91. doi: 10.1016/j.bbrc.2007.04.113. Epub 2007 Apr 26. Biochem Biophys Res Commun. 2007. PMID: 17509532 Free PMC article.

2

Nuclear hormone receptor targeted virtual screening.

Schapira M, Abagyan R, Totrov M. Schapira M, et al. Among authors: abagyan r. J Med Chem. 2003 Jul 3;46(14):3045-59. doi: 10.1021/jm0300173. J Med Chem. 2003. PMID: 12825943

3

METLIN: a metabolite mass spectral database.

Smith CA, O'Maille G, Want EJ, Qin C, Trauger SA, Brandon TR, Custodio DE, Abagyan R, Siuzdak G. Smith CA, et al. Among authors: abagyan r. Ther Drug Monit. 2005 Dec;27(6):747-51. doi: 10.1097/01.ftd.0000179845.53213.39. Ther Drug Monit. 2005. PMID: 16404815

4

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification.

Smith CA, Want EJ, O'Maille G, Abagyan R, Siuzdak G. Smith CA, et al. Among authors: abagyan r. Anal Chem. 2006 Feb 1;78(3):779-87. doi: 10.1021/ac051437y. Anal Chem. 2006. PMID: 16448051

5

Structure-based development of target-specific compound libraries.

Orry AJ, Abagyan RA, Cavasotto CN. Orry AJ, et al. Drug Discov Today. 2006 Mar;11(5-6):261-6. doi: 10.1016/S1359-6446(05)03717-7. Drug Discov Today. 2006. PMID: 16580603 Review.

6

Three-dimensional structure of the EphB2 receptor in complex with an antagonistic peptide reveals a novel mode of inhibition.

Chrencik JE, Brooun A, Recht MI, Nicola G, Davis LK, Abagyan R, Widmer H, Pasquale EB, Kuhn P. Chrencik JE, et al. Among authors: abagyan r. J Biol Chem. 2007 Dec 14;282(50):36505-13. doi: 10.1074/jbc.M706340200. Epub 2007 Sep 26. J Biol Chem. 2007. PMID: 17897949 Free PMC article.

7

New method for the assessment of all drug-like pockets across a structural genome.

Nicola G, Smith CA, Abagyan R. Nicola G, et al. Among authors: abagyan r. J Comput Biol. 2008 Apr;15(3):231-40. doi: 10.1089/cmb.2007.0178. J Comput Biol. 2008. PMID: 18333758 Free PMC article.

8

Type-II kinase inhibitor docking, screening, and profiling using modified structures of active kinase states.

Kufareva I, Abagyan R. Kufareva I, et al. Among authors: abagyan r. J Med Chem. 2008 Dec 25;51(24):7921-32. doi: 10.1021/jm8010299. J Med Chem. 2008. PMID: 19053777 Free PMC article.

9

Structure-based approaches to antibiotic drug discovery.

Nicola G, Abagyan R. Nicola G, et al. Among authors: abagyan r. Curr Protoc Microbiol. 2009 Feb;Chapter 17:Unit17.2. doi: 10.1002/9780471729259.mc1702s12. Curr Protoc Microbiol. 2009. PMID: 19235149

10

PeptiSite: a structural database of peptide binding sites in 4D.

Acharya C, Kufareva I, Ilatovskiy AV, Abagyan R. Acharya C, et al. Among authors: abagyan r. Biochem Biophys Res Commun. 2014 Mar 21;445(4):717-23. doi: 10.1016/j.bbrc.2013.12.132. Epub 2014 Jan 6. Biochem Biophys Res Commun. 2014. PMID: 24406170 Free PMC article.

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