Hodoscek M - Search Results

1

Intradomain LexA rotation is a prerequisite for DNA binding specificity.

Butala M, Hodoscek M, Anderluh G, Podlesek Z, Zgur-Bertok D. Butala M, et al. Among authors: hodoscek m. FEBS Lett. 2007 Oct 16;581(25):4816-20. doi: 10.1016/j.febslet.2007.09.006. Epub 2007 Sep 14. FEBS Lett. 2007. PMID: 17884043 Free article.

2

Double locking of an Escherichia coli promoter by two repressors prevents premature colicin expression and cell lysis.

Butala M, Sonjak S, Kamenšek S, Hodošček M, Browning DF, Žgur-Bertok D, Busby SJ. Butala M, et al. Among authors: hodoscek m. Mol Microbiol. 2012 Oct;86(1):129-39. doi: 10.1111/j.1365-2958.2012.08179.x. Epub 2012 Aug 13. Mol Microbiol. 2012. PMID: 22812562 Free article.

3

Targeted molecular dynamics simulation studies of binding and conformational changes in E. coli MurD.

Perdih A, Kotnik M, Hodoscek M, Solmajer T. Perdih A, et al. Among authors: hodoscek m. Proteins. 2007 Jul 1;68(1):243-54. doi: 10.1002/prot.21374. Proteins. 2007. PMID: 17427948

4

Structure-based function prediction of uncharacterized protein using binding sites comparison.

Konc J, Hodošček M, Ogrizek M, Trykowska Konc J, Janežič D. Konc J, et al. Among authors: hodoscek m. PLoS Comput Biol. 2013;9(11):e1003341. doi: 10.1371/journal.pcbi.1003341. Epub 2013 Nov 14. PLoS Comput Biol. 2013. PMID: 24244144 Free PMC article.

5

New force field for calcium binding sites in annexin-membrane complexes.

Merzel F, Hodoscek M, Janezic D, Sanson A. Merzel F, et al. Among authors: hodoscek m. J Comput Chem. 2006 Mar;27(4):446-52. doi: 10.1002/jcc.20340. J Comput Chem. 2006. PMID: 16419147

6

Copper(II) ion binding to cellular prion protein.

Zidar J, Pirc ET, Hodoscek M, Bukovec P. Zidar J, et al. Among authors: hodoscek m. J Chem Inf Model. 2008 Feb;48(2):283-7. doi: 10.1021/ci700226c. Epub 2008 Feb 2. J Chem Inf Model. 2008. PMID: 18247504

7

Structural insight into the unique binding properties of pyridylethanol(phenylethyl)amine inhibitor in human CYP51.

Zelenko U, Hodošček M, Rozman D, Golič Grdadolnik S. Zelenko U, et al. Among authors: hodoscek m. J Chem Inf Model. 2014 Dec 22;54(12):3384-95. doi: 10.1021/ci500556k. Epub 2014 Dec 5. J Chem Inf Model. 2014. PMID: 25419870

8

CROW for large scale macromolecular simulations.

Hodoscek M, Borstnik U, Janezic D. Hodoscek M, et al. Cell Mol Biol Lett. 2002;7(1):118-9. Cell Mol Biol Lett. 2002. PMID: 11944061

9

Development and validation of empirical force field parameters for netropsin.

Bren U, Hodoscek M, Koller J. Bren U, et al. Among authors: hodoscek m. J Chem Inf Model. 2005 Nov-Dec;45(6):1546-52. doi: 10.1021/ci050151r. J Chem Inf Model. 2005. PMID: 16309252

10

Interfacing Q-Chem and CHARMM to perform QM/MM reaction path calculations.

Woodcock HL 3rd, Hodošček M, Gilbert ATB, Gill PMW, Schaefer HF 3rd, Brooks BR. Woodcock HL 3rd, et al. Among authors: hodoscek m. J Comput Chem. 2007 Jul 15;28(9):1485-1502. doi: 10.1002/jcc.20587. J Comput Chem. 2007. PMID: 17334987

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