Niemistö A - Search Results

1

A K-means segmentation method for finding 2-D object areas based on 3-D image stacks obtained by confocal microscopy.

Niemistö A, Korpelainen T, Saleem R, Yli-Harja O, Aitchison J, Shmulevich I. Niemistö A, et al. Annu Int Conf IEEE Eng Med Biol Soc. 2007;2007:5559-62. doi: 10.1109/IEMBS.2007.4353606. Annu Int Conf IEEE Eng Med Biol Soc. 2007. PMID: 18003272

2

Extraction of the number of peroxisomes in yeast cells by automated image analysis.

Niemistö A, Selinummi J, Saleem R, Shmulevich I, Aitchison J, Yli-Harja O. Niemistö A, et al. Conf Proc IEEE Eng Med Biol Soc. 2006;2006:2353-6. doi: 10.1109/IEMBS.2006.259890. Conf Proc IEEE Eng Med Biol Soc. 2006. PMID: 17945710

3

Quantification of in vitro cell invasion through image analysis.

Niemisto A, Hu L, Yli-Harja O, Zhang W, Shmulevich I. Niemisto A, et al. Conf Proc IEEE Eng Med Biol Soc. 2004;2004:1703-6. doi: 10.1109/IEMBS.2004.1403512. Conf Proc IEEE Eng Med Biol Soc. 2004. PMID: 17272032

4

Automated quantification of lymph node size and number in surgical specimens of stage II colorectal cancer.

Niemisto A, Shmulevich I, Yli-Harja O, Chirieac LR, Hamilton SR. Niemisto A, et al. Conf Proc IEEE Eng Med Biol Soc. 2005;2005:6313-6. doi: 10.1109/IEMBS.2005.1615941. Conf Proc IEEE Eng Med Biol Soc. 2005. PMID: 17281711

5

Genome-wide analysis of effectors of peroxisome biogenesis.

Saleem RA, Long-O'Donnell R, Dilworth DJ, Armstrong AM, Jamakhandi AP, Wan Y, Knijnenburg TA, Niemistö A, Boyle J, Rachubinski RA, Shmulevich I, Aitchison JD. Saleem RA, et al. Among authors: niemisto a. PLoS One. 2010 Aug 4;5(8):e11953. doi: 10.1371/journal.pone.0011953. PLoS One. 2010. PMID: 20694151 Free PMC article.

6

Robust quantification of in vitro angiogenesis through image analysis.

Niemistö A, Dunmire V, Yli-Harja O, Zhang W, Shmulevich I. Niemistö A, et al. IEEE Trans Med Imaging. 2005 Apr;24(4):549-53. doi: 10.1109/tmi.2004.837339. IEEE Trans Med Imaging. 2005. PMID: 15822812

7

Dynamic analysis of MAPK signaling using a high-throughput microfluidic single-cell imaging platform.

Taylor RJ, Falconnet D, Niemistö A, Ramsey SA, Prinz S, Shmulevich I, Galitski T, Hansen CL. Taylor RJ, et al. Among authors: niemisto a. Proc Natl Acad Sci U S A. 2009 Mar 10;106(10):3758-63. doi: 10.1073/pnas.0813416106. Epub 2009 Feb 17. Proc Natl Acad Sci U S A. 2009. PMID: 19223588 Free PMC article.

8

Simulating fluorescent microscope images of cell populations.

Lehmussola A, Selinummi J, Ruusuvuori P, Niemisto A, Yli-Harja O. Lehmussola A, et al. Among authors: niemisto a. Conf Proc IEEE Eng Med Biol Soc. 2005;2005:3153-6. doi: 10.1109/IEMBS.2005.1617144. Conf Proc IEEE Eng Med Biol Soc. 2005. PMID: 17282913

9

Quantification of vesicles in differentiating human SH-SY5Y neuroblastoma cells by automated image analysis.

Selinummi J, Sarkanen JR, Niemistö A, Linne ML, Ylikomi T, Yli-Harja O, Jalonen TO. Selinummi J, et al. Among authors: niemisto a. Neurosci Lett. 2006 Mar 27;396(2):102-7. doi: 10.1016/j.neulet.2005.11.021. Epub 2005 Dec 13. Neurosci Lett. 2006. PMID: 16356645

10

Analysis of angiogenesis using in vitro experiments and stochastic growth models.

Niemistö A, Dunmire V, Yli-Harja O, Zhang W, Shmulevich I. Niemistö A, et al. Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Dec;72(6 Pt 1):062902. doi: 10.1103/PhysRevE.72.062902. Epub 2005 Dec 16. Phys Rev E Stat Nonlin Soft Matter Phys. 2005. PMID: 16485992

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