Shiloh Y - Search Results

1

SPIKE--a database, visualization and analysis tool of cellular signaling pathways.

Elkon R, Vesterman R, Amit N, Ulitsky I, Zohar I, Weisz M, Mass G, Orlev N, Sternberg G, Blekhman R, Assa J, Shiloh Y, Shamir R. Elkon R, et al. Among authors: shiloh y. BMC Bioinformatics. 2008 Feb 20;9:110. doi: 10.1186/1471-2105-9-110. BMC Bioinformatics. 2008. PMID: 18289391 Free PMC article.

2

Genome-wide in silico identification of transcriptional regulators controlling the cell cycle in human cells.

Elkon R, Linhart C, Sharan R, Shamir R, Shiloh Y. Elkon R, et al. Among authors: shiloh y. Genome Res. 2003 May;13(5):773-80. doi: 10.1101/gr.947203. Genome Res. 2003. PMID: 12727897 Free PMC article.

3

PIVOT: protein interacions visualizatiOn tool.

Orlev N, Shamir R, Shiloh Y. Orlev N, et al. Among authors: shiloh y. Bioinformatics. 2004 Feb 12;20(3):424-5. doi: 10.1093/bioinformatics/btg426. Epub 2004 Jan 22. Bioinformatics. 2004. PMID: 14960471

4

In silico identification of transcriptional regulators associated with c-Myc.

Elkon R, Zeller KI, Linhart C, Dang CV, Shamir R, Shiloh Y. Elkon R, et al. Among authors: shiloh y. Nucleic Acids Res. 2004 Sep 23;32(17):4955-61. doi: 10.1093/nar/gkh816. Print 2004. Nucleic Acids Res. 2004. PMID: 15388797 Free PMC article.

5

Dissection of a DNA-damage-induced transcriptional network using a combination of microarrays, RNA interference and computational promoter analysis.

Elkon R, Rashi-Elkeles S, Lerenthal Y, Linhart C, Tenne T, Amariglio N, Rechavi G, Shamir R, Shiloh Y. Elkon R, et al. Among authors: shiloh y. Genome Biol. 2005;6(5):R43. doi: 10.1186/gb-2005-6-5-r43. Epub 2005 Apr 13. Genome Biol. 2005. PMID: 15892871 Free PMC article.

6

EXPANDER--an integrative program suite for microarray data analysis.

Shamir R, Maron-Katz A, Tanay A, Linhart C, Steinfeld I, Sharan R, Shiloh Y, Elkon R. Shamir R, et al. Among authors: shiloh y. BMC Bioinformatics. 2005 Sep 21;6:232. doi: 10.1186/1471-2105-6-232. BMC Bioinformatics. 2005. PMID: 16176576 Free PMC article.

7

Deciphering transcriptional regulatory elements that encode specific cell cycle phasing by comparative genomics analysis.

Linhart C, Elkon R, Shiloh Y, Shamir R. Linhart C, et al. Among authors: shiloh y. Cell Cycle. 2005 Dec;4(12):1788-97. doi: 10.4161/cc.4.12.2173. Epub 2005 Dec 13. Cell Cycle. 2005. PMID: 16294034

8

Parallel induction of ATM-dependent pro- and antiapoptotic signals in response to ionizing radiation in murine lymphoid tissue.

Rashi-Elkeles S, Elkon R, Weizman N, Linhart C, Amariglio N, Sternberg G, Rechavi G, Barzilai A, Shamir R, Shiloh Y. Rashi-Elkeles S, et al. Among authors: shiloh y. Oncogene. 2006 Mar 9;25(10):1584-92. doi: 10.1038/sj.onc.1209189. Oncogene. 2006. PMID: 16314843

9

Functional genomic delineation of TLR-induced transcriptional networks.

Elkon R, Linhart C, Halperin Y, Shiloh Y, Shamir R. Elkon R, et al. Among authors: shiloh y. BMC Genomics. 2007 Oct 29;8:394. doi: 10.1186/1471-2164-8-394. BMC Genomics. 2007. PMID: 17967192 Free PMC article.

10

Expander: from expression microarrays to networks and functions.

Ulitsky I, Maron-Katz A, Shavit S, Sagir D, Linhart C, Elkon R, Tanay A, Sharan R, Shiloh Y, Shamir R. Ulitsky I, et al. Among authors: shiloh y. Nat Protoc. 2010 Feb;5(2):303-22. doi: 10.1038/nprot.2009.230. Epub 2010 Jan 28. Nat Protoc. 2010. PMID: 20134430

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