Perrakis A - Search Results

1

A knowledge-driven approach for crystallographic protein model completion.

Joosten K, Cohen SX, Emsley P, Mooij W, Lamzin VS, Perrakis A. Joosten K, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 2008 Apr;64(Pt 4):416-24. doi: 10.1107/S0907444908001558. Epub 2008 Mar 19. Acta Crystallogr D Biol Crystallogr. 2008. PMID: 18391408 Free PMC article.

2

Accelerated X-ray structure elucidation of a 36 kDa muramidase/transglycosylase using wARP.

Van Asselt EJ, Perrakis A, Kalk KH, Lamzin VS, Dijkstra BW. Van Asselt EJ, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 1998 Jan 1;54(Pt 1):58-73. doi: 10.1107/s0907444997010330. Acta Crystallogr D Biol Crystallogr. 1998. PMID: 9761817 Free article.

3

Automated protein model building combined with iterative structure refinement.

Perrakis A, Morris R, Lamzin VS. Perrakis A, et al. Nat Struct Biol. 1999 May;6(5):458-63. doi: 10.1038/8263. Nat Struct Biol. 1999. PMID: 10331874

4

Molecular, crystal and solution structure of a beta-cyclodextrin complex with the bromide salt of 2-(3-dimethylaminopropyl)tricyclo[3.3.1.1(3,7)]decan-2-ol, a potent antimicrobial drug.

Perrakis A, Antoniadou-Vyza E, Tsitsa P, Lamzin VS, Wilson KS, Hamodrakas SJ. Perrakis A, et al. Carbohydr Res. 1999 Apr 30;317(1-4):19-28. doi: 10.1016/s0008-6215(99)00021-x. Carbohydr Res. 1999. PMID: 10498440

5

Apotheosis, not apocalypse: methods in protein crystallography.

Lamzin VS, Perrakis A, Bricogne G, Jiang J, Swaminathan S, Sussman JL. Lamzin VS, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 2000 Nov;56(Pt 11):1510-1. doi: 10.1107/s0907444900010751. Acta Crystallogr D Biol Crystallogr. 2000. PMID: 11053868 No abstract available.

6

Current state of automated crystallographic data analysis.

Lamzin VS, Perrakis A. Lamzin VS, et al. Among authors: perrakis a. Nat Struct Biol. 2000 Nov;7 Suppl:978-81. doi: 10.1038/80763. Nat Struct Biol. 2000. PMID: 11104005 Review.

7

ARP/wARP and molecular replacement.

Perrakis A, Harkiolaki M, Wilson KS, Lamzin VS. Perrakis A, et al. Acta Crystallogr D Biol Crystallogr. 2001 Oct;57(Pt 10):1445-50. doi: 10.1107/s0907444901014007. Epub 2001 Sep 21. Acta Crystallogr D Biol Crystallogr. 2001. PMID: 11567158

8

ARP/wARP's model-building algorithms. I. The main chain.

Morris RJ, Perrakis A, Lamzin VS. Morris RJ, et al. Among authors: perrakis a. Acta Crystallogr D Biol Crystallogr. 2002 Jun;58(Pt 6 Pt 2):968-75. doi: 10.1107/s0907444902005462. Epub 2002 May 29. Acta Crystallogr D Biol Crystallogr. 2002. PMID: 12037299

9

Breaking good resolutions with ARP/wARP.

Morris RJ, Zwart PH, Cohen S, Fernandez FJ, Kakaris M, Kirillova O, Vonrhein C, Perrakis A, Lamzin VS. Morris RJ, et al. Among authors: perrakis a. J Synchrotron Radiat. 2004 Jan 1;11(Pt 1):56-9. doi: 10.1107/s090904950302394x. Epub 2003 Nov 28. J Synchrotron Radiat. 2004. PMID: 14646134

10

ARP/wARP and automatic interpretation of protein electron density maps.

Morris RJ, Perrakis A, Lamzin VS. Morris RJ, et al. Among authors: perrakis a. Methods Enzymol. 2003;374:229-44. doi: 10.1016/S0076-6879(03)74011-7. Methods Enzymol. 2003. PMID: 14696376 No abstract available.

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