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RASCL: Rapid Assessment of Selection in CLades through molecular sequence analysis.
Lucaci AG, Zehr JD, Shank SD, Bouvier D, Ostrovsky A, Mei H, Nekrutenko A, Martin DP, Kosakovsky Pond SL. Lucaci AG, et al. Among authors: kosakovsky pond sl. PLoS One. 2022 Nov 2;17(11):e0275623. doi: 10.1371/journal.pone.0275623. eCollection 2022. PLoS One. 2022. PMID: 36322581 Free PMC article.
Neutralizing antibody responses drive the evolution of human immunodeficiency virus type 1 envelope during recent HIV infection.
Frost SD, Wrin T, Smith DM, Kosakovsky Pond SL, Liu Y, Paxinos E, Chappey C, Galovich J, Beauchaine J, Petropoulos CJ, Little SJ, Richman DD. Frost SD, et al. Among authors: kosakovsky pond sl. Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18514-9. doi: 10.1073/pnas.0504658102. Epub 2005 Dec 9. Proc Natl Acad Sci U S A. 2005. PMID: 16339909 Free PMC article.
GARD: a genetic algorithm for recombination detection.
Kosakovsky Pond SL, Posada D, Gravenor MB, Woelk CH, Frost SD. Kosakovsky Pond SL, et al. Bioinformatics. 2006 Dec 15;22(24):3096-8. doi: 10.1093/bioinformatics/btl474. Epub 2006 Nov 16. Bioinformatics. 2006. PMID: 17110367
160 results