Xuan J - Search Results

1

Knowledge-guided multi-scale independent component analysis for biomarker identification.

Chen L, Xuan J, Wang C, Shih IeM, Wang Y, Zhang Z, Hoffman E, Clarke R. Chen L, et al. Among authors: xuan j. BMC Bioinformatics. 2008 Oct 6;9:416. doi: 10.1186/1471-2105-9-416. BMC Bioinformatics. 2008. PMID: 18837990 Free PMC article.

2

Latent variable and nICA modeling of pathway gene module composite.

Gong T, Zhu Y, Xuan J, Li H, Clarke R, Hoffman EP, Wang Y. Gong T, et al. Among authors: xuan j. Conf Proc IEEE Eng Med Biol Soc. 2006;2006:5872-5. doi: 10.1109/IEMBS.2006.260697. Conf Proc IEEE Eng Med Biol Soc. 2006. PMID: 17946342

3

Motif-directed network component analysis for regulatory network inference.

Wang C, Xuan J, Chen L, Zhao P, Wang Y, Clarke R, Hoffman E. Wang C, et al. Among authors: xuan j. BMC Bioinformatics. 2008;9 Suppl 1(Suppl 1):S21. doi: 10.1186/1471-2105-9-S1-S21. BMC Bioinformatics. 2008. PMID: 18315853 Free PMC article.

4

Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data.

Zhang Y, Xuan J, de los Reyes BG, Clarke R, Ressom HW. Zhang Y, et al. Among authors: xuan j. BMC Bioinformatics. 2008 Apr 21;9:203. doi: 10.1186/1471-2105-9-203. BMC Bioinformatics. 2008. PMID: 18426580 Free PMC article.

5

A ground truth based comparative study on clustering of gene expression data.

Zhu Y, Wang Z, Miller DJ, Clarke R, Xuan J, Hoffman EP, Wang Y. Zhu Y, et al. Among authors: xuan j. Front Biosci. 2008 May 1;13:3839-49. doi: 10.2741/2972. Front Biosci. 2008. PMID: 18508478 Free PMC article. Review.

6

caBIG VISDA: modeling, visualization, and discovery for cluster analysis of genomic data.

Zhu Y, Li H, Miller DJ, Wang Z, Xuan J, Clarke R, Hoffman EP, Wang Y. Zhu Y, et al. Among authors: xuan j. BMC Bioinformatics. 2008 Sep 18;9:383. doi: 10.1186/1471-2105-9-383. BMC Bioinformatics. 2008. PMID: 18801195 Free PMC article.

7

Differential dependency network analysis to identify condition-specific topological changes in biological networks.

Zhang B, Li H, Riggins RB, Zhan M, Xuan J, Zhang Z, Hoffman EP, Clarke R, Wang Y. Zhang B, et al. Among authors: xuan j. Bioinformatics. 2009 Feb 15;25(4):526-32. doi: 10.1093/bioinformatics/btn660. Epub 2008 Dec 26. Bioinformatics. 2009. PMID: 19112081 Free PMC article.

8

Gene module identification from microarray data using nonnegative independent component analysis.

Gong T, Xuan J, Wang C, Li H, Hoffman E, Clarke R, Wang Y. Gong T, et al. Among authors: xuan j. Gene Regul Syst Bio. 2008 Jan 15;1:349-63. Gene Regul Syst Bio. 2008. PMID: 19936101 Free PMC article.

9

Biomarker identification by knowledge-driven multilevel ICA and motif analysis.

Chen L, Xuan J, Wang C, Wang Y, Shih IeM, Wang TL, Zhang Z, Clarke R, Hoffman EP. Chen L, et al. Among authors: xuan j. Int J Data Min Bioinform. 2009;3(4):365-81. doi: 10.1504/ijdmb.2009.029201. Int J Data Min Bioinform. 2009. PMID: 20052902

10

Identification of condition-specific regulatory modules through multi-level motif and mRNA expression analysis.

Chen L, Xuan J, Wang Y, Hoffman EP, Riggins RB, Clarke R. Chen L, et al. Among authors: xuan j. Int J Comput Biol Drug Des. 2009;2(1):1-20. doi: 10.1504/ijcbdd.2009.027582. Int J Comput Biol Drug Des. 2009. PMID: 20054984 Free PMC article.

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