Nagaraj N - Search Results

1

Detergent-based but gel-free method allows identification of several hundred membrane proteins in single LC-MS runs.

Nagaraj N, Lu A, Mann M, Wiśniewski JR. Nagaraj N, et al. J Proteome Res. 2008 Nov;7(11):5028-32. doi: 10.1021/pr800412j. Epub 2008 Oct 8. J Proteome Res. 2008. PMID: 18839980

2

A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics.

Cox J, Matic I, Hilger M, Nagaraj N, Selbach M, Olsen JV, Mann M. Cox J, et al. Among authors: nagaraj n. Nat Protoc. 2009;4(5):698-705. doi: 10.1038/nprot.2009.36. Nat Protoc. 2009. PMID: 19373234

3

Universal sample preparation method for proteome analysis.

Wiśniewski JR, Zougman A, Nagaraj N, Mann M. Wiśniewski JR, et al. Among authors: nagaraj n. Nat Methods. 2009 May;6(5):359-62. doi: 10.1038/nmeth.1322. Epub 2009 Apr 19. Nat Methods. 2009. PMID: 19377485

4

Brain phosphoproteome obtained by a FASP-based method reveals plasma membrane protein topology.

Wiśniewski JR, Nagaraj N, Zougman A, Gnad F, Mann M. Wiśniewski JR, et al. Among authors: nagaraj n. J Proteome Res. 2010 Jun 4;9(6):3280-9. doi: 10.1021/pr1002214. J Proteome Res. 2010. PMID: 20415495

5

Feasibility of large-scale phosphoproteomics with higher energy collisional dissociation fragmentation.

Nagaraj N, D'Souza RC, Cox J, Olsen JV, Mann M. Nagaraj N, et al. J Proteome Res. 2010 Dec 3;9(12):6786-94. doi: 10.1021/pr100637q. Epub 2010 Oct 26. J Proteome Res. 2010. PMID: 20873877

6

Quantitative analysis of the intra- and inter-individual variability of the normal urinary proteome.

Nagaraj N, Mann M. Nagaraj N, et al. J Proteome Res. 2011 Feb 4;10(2):637-45. doi: 10.1021/pr100835s. Epub 2011 Jan 5. J Proteome Res. 2011. PMID: 21126025

7

Mass spectrometry-based proteomics using Q Exactive, a high-performance benchtop quadrupole Orbitrap mass spectrometer.

Michalski A, Damoc E, Hauschild JP, Lange O, Wieghaus A, Makarov A, Nagaraj N, Cox J, Mann M, Horning S. Michalski A, et al. Among authors: nagaraj n. Mol Cell Proteomics. 2011 Sep;10(9):M111.011015. doi: 10.1074/mcp.M111.011015. Epub 2011 Jun 3. Mol Cell Proteomics. 2011. PMID: 21642640 Free PMC article.

8

Large-scale phosphosite quantification in tissues by a spike-in SILAC method.

Monetti M, Nagaraj N, Sharma K, Mann M. Monetti M, et al. Among authors: nagaraj n. Nat Methods. 2011 Jul 10;8(8):655-8. doi: 10.1038/nmeth.1647. Nat Methods. 2011. PMID: 21743459

9

System-wide perturbation analysis with nearly complete coverage of the yeast proteome by single-shot ultra HPLC runs on a bench top Orbitrap.

Nagaraj N, Kulak NA, Cox J, Neuhauser N, Mayr K, Hoerning O, Vorm O, Mann M. Nagaraj N, et al. Mol Cell Proteomics. 2012 Mar;11(3):M111.013722. doi: 10.1074/mcp.M111.013722. Epub 2011 Oct 20. Mol Cell Proteomics. 2012. PMID: 22021278 Free PMC article.

10

Deep proteome and transcriptome mapping of a human cancer cell line.

Nagaraj N, Wisniewski JR, Geiger T, Cox J, Kircher M, Kelso J, Pääbo S, Mann M. Nagaraj N, et al. Mol Syst Biol. 2011 Nov 8;7:548. doi: 10.1038/msb.2011.81. Mol Syst Biol. 2011. PMID: 22068331 Free PMC article.

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