Gresham D - Search Results

1

The repertoire and dynamics of evolutionary adaptations to controlled nutrient-limited environments in yeast.

Gresham D, Desai MM, Tucker CM, Jenq HT, Pai DA, Ward A, DeSevo CG, Botstein D, Dunham MJ. Gresham D, et al. PLoS Genet. 2008 Dec;4(12):e1000303. doi: 10.1371/journal.pgen.1000303. Epub 2008 Dec 12. PLoS Genet. 2008. PMID: 19079573 Free PMC article.

2

Optimized quantification of intra-host viral diversity in SARS-CoV-2 and influenza virus sequence data.

Roder AE, Johnson KEE, Knoll M, Khalfan M, Wang B, Schultz-Cherry S, Banakis S, Kreitman A, Mederos C, Youn JH, Mercado R, Wang W, Chung M, Ruchnewitz D, Samanovic MI, Mulligan MJ, Lässig M, Luksza M, Das S, Gresham D, Ghedin E. Roder AE, et al. Among authors: gresham d. mBio. 2023 Aug 31;14(4):e0104623. doi: 10.1128/mbio.01046-23. Epub 2023 Jun 30. mBio. 2023. PMID: 37389439 Free PMC article.

3

Metagenomes from Soils along an Agricultural Transect in Ulster County, New York.

de Santana CO, Spealman P, Gresham D, Perron GG. de Santana CO, et al. Among authors: gresham d. Microbiol Resour Announc. 2023 Mar 16;12(3):e0101522. doi: 10.1128/mra.01015-22. Epub 2023 Feb 13. Microbiol Resour Announc. 2023. PMID: 36779724 Free PMC article.

4

Genome-wide detection of polymorphisms at nucleotide resolution with a single DNA microarray.

Gresham D, Ruderfer DM, Pratt SC, Schacherer J, Dunham MJ, Botstein D, Kruglyak L. Gresham D, et al. Science. 2006 Mar 31;311(5769):1932-6. doi: 10.1126/science.1123726. Epub 2006 Mar 9. Science. 2006. PMID: 16527929

5

Accumulation of recessive lethal mutations in Saccharomyces cerevisiae mlh1 mismatch repair mutants is not associated with gross chromosomal rearrangements.

Heck JA, Gresham D, Botstein D, Alani E. Heck JA, et al. Among authors: gresham d. Genetics. 2006 Sep;174(1):519-23. doi: 10.1534/genetics.106.059311. Epub 2006 Jul 2. Genetics. 2006. PMID: 16816424 Free PMC article.

6

Global mapping of transposon location.

Gabriel A, Dapprich J, Kunkel M, Gresham D, Pratt SC, Dunham MJ. Gabriel A, et al. Among authors: gresham d. PLoS Genet. 2006 Dec 15;2(12):e212. doi: 10.1371/journal.pgen.0020212. Epub 2006 Nov 1. PLoS Genet. 2006. PMID: 17173485 Free PMC article.

7

Genome-wide analysis of nucleotide-level variation in commonly used Saccharomyces cerevisiae strains.

Schacherer J, Ruderfer DM, Gresham D, Dolinski K, Botstein D, Kruglyak L. Schacherer J, et al. Among authors: gresham d. PLoS One. 2007 Mar 28;2(3):e322. doi: 10.1371/journal.pone.0000322. PLoS One. 2007. PMID: 17389913 Free PMC article.

8

Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast.

Brauer MJ, Huttenhower C, Airoldi EM, Rosenstein R, Matese JC, Gresham D, Boer VM, Troyanskaya OG, Botstein D. Brauer MJ, et al. Among authors: gresham d. Mol Biol Cell. 2008 Jan;19(1):352-67. doi: 10.1091/mbc.e07-08-0779. Epub 2007 Oct 24. Mol Biol Cell. 2008. PMID: 17959824 Free PMC article.

9

Comparing whole genomes using DNA microarrays.

Gresham D, Dunham MJ, Botstein D. Gresham D, et al. Nat Rev Genet. 2008 Apr;9(4):291-302. doi: 10.1038/nrg2335. Nat Rev Genet. 2008. PMID: 18347592 Free PMC article. Review.

10

Predicting cellular growth from gene expression signatures.

Airoldi EM, Huttenhower C, Gresham D, Lu C, Caudy AA, Dunham MJ, Broach JR, Botstein D, Troyanskaya OG. Airoldi EM, et al. Among authors: gresham d. PLoS Comput Biol. 2009 Jan;5(1):e1000257. doi: 10.1371/journal.pcbi.1000257. Epub 2009 Jan 2. PLoS Comput Biol. 2009. PMID: 19119411 Free PMC article.

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