Schildbach JF - Search Results

1

Using fluorophore-labeled oligonucleotides to measure affinities of protein-DNA interactions.

Anderson BJ, Larkin C, Guja K, Schildbach JF. Anderson BJ, et al. Among authors: schildbach jf. Methods Enzymol. 2008;450:253-72. doi: 10.1016/S0076-6879(08)03412-5. Methods Enzymol. 2008. PMID: 19152864 Free PMC article. Review.

2

Subdomain organization and catalytic residues of the F factor TraI relaxase domain.

Street LM, Harley MJ, Stern JC, Larkin C, Williams SL, Miller DL, Dohm JA, Rodgers ME, Schildbach JF. Street LM, et al. Among authors: schildbach jf. Biochim Biophys Acta. 2003 Mar 21;1646(1-2):86-99. doi: 10.1016/s1570-9639(02)00553-8. Biochim Biophys Acta. 2003. PMID: 12637015

3

Crystallization and preliminary X-ray characterization of the relaxase domain of F factor TraI.

Larkin C, Datta S, Nezami A, Dohm JA, Schildbach JF. Larkin C, et al. Among authors: schildbach jf. Acta Crystallogr D Biol Crystallogr. 2003 Aug;59(Pt 8):1514-6. doi: 10.1107/s0907444903012964. Epub 2003 Jul 23. Acta Crystallogr D Biol Crystallogr. 2003. PMID: 12876370

4

Structural insights into single-stranded DNA binding and cleavage by F factor TraI.

Datta S, Larkin C, Schildbach JF. Datta S, et al. Among authors: schildbach jf. Structure. 2003 Nov;11(11):1369-79. doi: 10.1016/j.str.2003.10.001. Structure. 2003. PMID: 14604527 Free article.

5

Energetics of the sequence-specific binding of single-stranded DNA by the F factor relaxase domain.

Stern JC, Anderson BJ, Owens TJ, Schildbach JF. Stern JC, et al. Among authors: schildbach jf. J Biol Chem. 2004 Jul 9;279(28):29155-9. doi: 10.1074/jbc.M402965200. Epub 2004 Apr 28. J Biol Chem. 2004. PMID: 15123728 Free article.

6

Inter- and intramolecular determinants of the specificity of single-stranded DNA binding and cleavage by the F factor relaxase.

Larkin C, Datta S, Harley MJ, Anderson BJ, Ebie A, Hargreaves V, Schildbach JF. Larkin C, et al. Among authors: schildbach jf. Structure. 2005 Oct;13(10):1533-44. doi: 10.1016/j.str.2005.06.013. Structure. 2005. PMID: 16216584 Free article.

7

An intrastrand three-DNA-base interaction is a key specificity determinant of F transfer initiation and of F TraI relaxase DNA recognition and cleavage.

Hekman K, Guja K, Larkin C, Schildbach JF. Hekman K, et al. Among authors: schildbach jf. Nucleic Acids Res. 2008 Aug;36(14):4565-72. doi: 10.1093/nar/gkn422. Epub 2008 Jul 8. Nucleic Acids Res. 2008. PMID: 18611948 Free PMC article.

8

Completing the specificity swap: Single-stranded DNA recognition by F and R100 TraI relaxase domains.

Guja KE, Schildbach JF. Guja KE, et al. Among authors: schildbach jf. Plasmid. 2015 Jul;80:1-7. doi: 10.1016/j.plasmid.2015.03.006. Epub 2015 Apr 1. Plasmid. 2015. PMID: 25841886

9

R150A mutant of F TraI relaxase domain: reduced affinity and specificity for single-stranded DNA and altered fluorescence anisotropy of a bound labeled oligonucleotide.

Harley MJ, Toptygin D, Troxler T, Schildbach JF. Harley MJ, et al. Among authors: schildbach jf. Biochemistry. 2002 May 21;41(20):6460-8. doi: 10.1021/bi011969i. Biochemistry. 2002. PMID: 12009909

10

Swapping single-stranded DNA sequence specificities of relaxases from conjugative plasmids F and R100.

Harley MJ, Schildbach JF. Harley MJ, et al. Among authors: schildbach jf. Proc Natl Acad Sci U S A. 2003 Sep 30;100(20):11243-8. doi: 10.1073/pnas.2035001100. Epub 2003 Sep 22. Proc Natl Acad Sci U S A. 2003. PMID: 14504391 Free PMC article.

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