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Improved quality control processing of peptide-centric LC-MS proteomics data.
Matzke MM, Waters KM, Metz TO, Jacobs JM, Sims AC, Baric RS, Pounds JG, Webb-Robertson BJ. Matzke MM, et al. Among authors: pounds jg. Bioinformatics. 2011 Oct 15;27(20):2866-72. doi: 10.1093/bioinformatics/btr479. Epub 2011 Aug 18. Bioinformatics. 2011. PMID: 21852304 Free PMC article.
Bayesian proteoform modeling improves protein quantification of global proteomic measurements.
Webb-Robertson BJ, Matzke MM, Datta S, Payne SH, Kang J, Bramer LM, Nicora CD, Shukla AK, Metz TO, Rodland KD, Smith RD, Tardiff MF, McDermott JE, Pounds JG, Waters KM. Webb-Robertson BJ, et al. Among authors: pounds jg. Mol Cell Proteomics. 2014 Dec;13(12):3639-46. doi: 10.1074/mcp.M113.030932. Mol Cell Proteomics. 2014. PMID: 25433089 Free PMC article.
Review, evaluation, and discussion of the challenges of missing value imputation for mass spectrometry-based label-free global proteomics.
Webb-Robertson BJ, Wiberg HK, Matzke MM, Brown JN, Wang J, McDermott JE, Smith RD, Rodland KD, Metz TO, Pounds JG, Waters KM. Webb-Robertson BJ, et al. Among authors: pounds jg. J Proteome Res. 2015 May 1;14(5):1993-2001. doi: 10.1021/pr501138h. Epub 2015 Apr 22. J Proteome Res. 2015. PMID: 25855118 Free PMC article. Review.
96 results