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Page 1
Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria.
Slater SC, Goldman BS, Goodner B, Setubal JC, Farrand SK, Nester EW, Burr TJ, Banta L, Dickerman AW, Paulsen I, Otten L, Suen G, Welch R, Almeida NF, Arnold F, Burton OT, Du Z, Ewing A, Godsy E, Heisel S, Houmiel KL, Jhaveri J, Lu J, Miller NM, Norton S, Chen Q, Phoolcharoen W, Ohlin V, Ondrusek D, Pride N, Stricklin SL, Sun J, Wheeler C, Wilson L, Zhu H, Wood DW. Slater SC, et al. Among authors: setubal jc. J Bacteriol. 2009 Apr;191(8):2501-11. doi: 10.1128/JB.01779-08. Epub 2009 Feb 27. J Bacteriol. 2009. PMID: 19251847 Free PMC article.
The genome of the natural genetic engineer Agrobacterium tumefaciens C58.
Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE, Almeida NF Jr, Woo L, Chen Y, Paulsen IT, Eisen JA, Karp PD, Bovee D Sr, Chapman P, Clendenning J, Deatherage G, Gillet W, Grant C, Kutyavin T, Levy R, Li MJ, McClelland E, Palmieri A, Raymond C, Rouse G, Saenphimmachak C, Wu Z, Romero P, Gordon D, Zhang S, Yoo H, Tao Y, Biddle P, Jung M, Krespan W, Perry M, Gordon-Kamm B, Liao L, Kim S, Hendrick C, Zhao ZY, Dolan M, Chumley F, Tingey SV, Tomb JF, Gordon MP, Olson MV, Nester EW. Wood DW, et al. Among authors: setubal jc. Science. 2001 Dec 14;294(5550):2317-23. doi: 10.1126/science.1066804. Science. 2001. PMID: 11743193
Comparative analyses of the complete genome sequences of Pierce's disease and citrus variegated chlorosis strains of Xylella fastidiosa.
Van Sluys MA, de Oliveira MC, Monteiro-Vitorello CB, Miyaki CY, Furlan LR, Camargo LE, da Silva AC, Moon DH, Takita MA, Lemos EG, Machado MA, Ferro MI, da Silva FR, Goldman MH, Goldman GH, Lemos MV, El-Dorry H, Tsai SM, Carrer H, Carraro DM, de Oliveira RC, Nunes LR, Siqueira WJ, Coutinho LL, Kimura ET, Ferro ES, Harakava R, Kuramae EE, Marino CL, Giglioti E, Abreu IL, Alves LM, do Amaral AM, Baia GS, Blanco SR, Brito MS, Cannavan FS, Celestino AV, da Cunha AF, Fenille RC, Ferro JA, Formighieri EF, Kishi LT, Leoni SG, Oliveira AR, Rosa VE Jr, Sassaki FT, Sena JA, de Souza AA, Truffi D, Tsukumo F, Yanai GM, Zaros LG, Civerolo EL, Simpson AJ, Almeida NF Jr, Setubal JC, Kitajima JP. Van Sluys MA, et al. Among authors: setubal jc. J Bacteriol. 2003 Feb;185(3):1018-26. doi: 10.1128/JB.185.3.1018-1026.2003. J Bacteriol. 2003. PMID: 12533478 Free PMC article.
Comparative genomics analyses of citrus-associated bacteria.
Moreira LM, de Souza RF, Almeida NF Jr, Setubal JC, Oliveira JC, Furlan LR, Ferro JA, da Silva AC. Moreira LM, et al. Among authors: setubal jc. Annu Rev Phytopathol. 2004;42:163-84. doi: 10.1146/annurev.phyto.42.040803.140310. Annu Rev Phytopathol. 2004. PMID: 15283664 Review.
A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000.
Almeida NF, Yan S, Lindeberg M, Studholme DJ, Schneider DJ, Condon B, Liu H, Viana CJ, Warren A, Evans C, Kemen E, Maclean D, Angot A, Martin GB, Jones JD, Collmer A, Setubal JC, Vinatzer BA. Almeida NF, et al. Among authors: setubal jc. Mol Plant Microbe Interact. 2009 Jan;22(1):52-62. doi: 10.1094/MPMI-22-1-0052. Mol Plant Microbe Interact. 2009. PMID: 19061402 Free article.
Analysis of ten Brucella genomes reveals evidence for horizontal gene transfer despite a preferred intracellular lifestyle.
Wattam AR, Williams KP, Snyder EE, Almeida NF Jr, Shukla M, Dickerman AW, Crasta OR, Kenyon R, Lu J, Shallom JM, Yoo H, Ficht TA, Tsolis RM, Munk C, Tapia R, Han CS, Detter JC, Bruce D, Brettin TS, Sobral BW, Boyle SM, Setubal JC. Wattam AR, et al. Among authors: setubal jc. J Bacteriol. 2009 Jun;191(11):3569-79. doi: 10.1128/JB.01767-08. Epub 2009 Apr 3. J Bacteriol. 2009. PMID: 19346311 Free PMC article.
Genome sequence of Azotobacter vinelandii, an obligate aerobe specialized to support diverse anaerobic metabolic processes.
Setubal JC, dos Santos P, Goldman BS, Ertesvåg H, Espin G, Rubio LM, Valla S, Almeida NF, Balasubramanian D, Cromes L, Curatti L, Du Z, Godsy E, Goodner B, Hellner-Burris K, Hernandez JA, Houmiel K, Imperial J, Kennedy C, Larson TJ, Latreille P, Ligon LS, Lu J, Maerk M, Miller NM, Norton S, O'Carroll IP, Paulsen I, Raulfs EC, Roemer R, Rosser J, Segura D, Slater S, Stricklin SL, Studholme DJ, Sun J, Viana CJ, Wallin E, Wang B, Wheeler C, Zhu H, Dean DR, Dixon R, Wood D. Setubal JC, et al. J Bacteriol. 2009 Jul;191(14):4534-45. doi: 10.1128/JB.00504-09. Epub 2009 May 8. J Bacteriol. 2009. PMID: 19429624 Free PMC article.
Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper.
Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol M, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB. Potnis N, et al. Among authors: setubal jc. BMC Genomics. 2011 Mar 11;12:146. doi: 10.1186/1471-2164-12-146. BMC Genomics. 2011. PMID: 21396108 Free PMC article.
171 results