Engelen K - Search Results

1

The condition-dependent transcriptional network in Escherichia coli.

Lemmens K, De Bie T, Dhollander T, Monsieurs P, De Moor B, Collado-Vides J, Engelen K, Marchal K. Lemmens K, et al. Among authors: engelen k. Ann N Y Acad Sci. 2009 Mar;1158:29-35. doi: 10.1111/j.1749-6632.2008.03746.x. Ann N Y Acad Sci. 2009. PMID: 19348629

2

Discovering transcriptional modules from motif, chip-chip and microarray data.

De Bie T, Monsieurs P, Engelen K, De Moor B, Cristianini N, Marchal K. De Bie T, et al. Among authors: engelen k. Pac Symp Biocomput. 2005:483-94. Pac Symp Biocomput. 2005. PMID: 15759653 Free article.

3

Inferring transcriptional modules from ChIP-chip, motif and microarray data.

Lemmens K, Dhollander T, De Bie T, Monsieurs P, Engelen K, Smets B, Winderickx J, De Moor B, Marchal K. Lemmens K, et al. Among authors: engelen k. Genome Biol. 2006;7(5):R37. doi: 10.1186/gb-2006-7-5-r37. Epub 2006 May 5. Genome Biol. 2006. PMID: 16677396 Free PMC article.

4

DISTILLER: a data integration framework to reveal condition dependency of complex regulons in Escherichia coli.

Lemmens K, De Bie T, Dhollander T, De Keersmaecker SC, Thijs IM, Schoofs G, De Weerdt A, De Moor B, Vanderleyden J, Collado-Vides J, Engelen K, Marchal K. Lemmens K, et al. Among authors: engelen k. Genome Biol. 2009;10(3):R27. doi: 10.1186/gb-2009-10-3-r27. Epub 2009 Mar 6. Genome Biol. 2009. PMID: 19265557 Free PMC article.

5

ViTraM: visualization of transcriptional modules.

Sun H, Lemmens K, Van den Bulcke T, Engelen K, De Moor B, Marchal K. Sun H, et al. Among authors: engelen k. Bioinformatics. 2009 Sep 15;25(18):2450-1. doi: 10.1093/bioinformatics/btp400. Epub 2009 Jul 8. Bioinformatics. 2009. PMID: 19587224

6

Inferring the transcriptional network of Bacillus subtilis.

Fadda A, Fierro AC, Lemmens K, Monsieurs P, Engelen K, Marchal K. Fadda A, et al. Among authors: engelen k. Mol Biosyst. 2009 Dec;5(12):1840-52. doi: 10.1039/b907310h. Epub 2009 Jul 28. Mol Biosyst. 2009. PMID: 20023724

7

INCLUSive: A web portal and service registry for microarray and regulatory sequence analysis.

Coessens B, Thijs G, Aerts S, Marchal K, De Smet F, Engelen K, Glenisson P, Moreau Y, Mathys J, De Moor B. Coessens B, et al. Among authors: engelen k. Nucleic Acids Res. 2003 Jul 1;31(13):3468-70. doi: 10.1093/nar/gkg615. Nucleic Acids Res. 2003. PMID: 12824346 Free PMC article.

8

A calibration method for estimating absolute expression levels from microarray data.

Engelen K, Naudts B, De Moor B, Marchal K. Engelen K, et al. Bioinformatics. 2006 May 15;22(10):1251-8. doi: 10.1093/bioinformatics/btl068. Epub 2006 Mar 7. Bioinformatics. 2006. PMID: 16522672

9

CALIB: a Bioconductor package for estimating absolute expression levels from two-color microarray data.

Zhao H, Engelen K, De Moor B, Marchal K. Zhao H, et al. Among authors: engelen k. Bioinformatics. 2007 Jul 1;23(13):1700-1. doi: 10.1093/bioinformatics/btm159. Epub 2007 May 7. Bioinformatics. 2007. PMID: 17485432

10

Joint mapping of genes and conditions via multidimensional unfolding analysis.

Van Deun K, Marchal K, Heiser WJ, Engelen K, Van Mechelen I. Van Deun K, et al. Among authors: engelen k. BMC Bioinformatics. 2007 Jun 5;8:181. doi: 10.1186/1471-2105-8-181. BMC Bioinformatics. 2007. PMID: 17550582 Free PMC article.

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