Sadygov RG - Search Results

1

A new probabilistic database search algorithm for ETD spectra.

Sadygov RG, Good DM, Swaney DL, Coon JJ. Sadygov RG, et al. J Proteome Res. 2009 Jun;8(6):3198-205. doi: 10.1021/pr900153b. J Proteome Res. 2009. PMID: 19354237 Free PMC article.

2

Code developments to improve the efficiency of automated MS/MS spectra interpretation.

Sadygov RG, Eng J, Durr E, Saraf A, McDonald H, MacCoss MJ, Yates JR 3rd. Sadygov RG, et al. J Proteome Res. 2002 May-Jun;1(3):211-5. doi: 10.1021/pr015514r. J Proteome Res. 2002. PMID: 12645897

3

Using power spectrum analysis to evaluate (18)O-water labeling data acquired from low resolution mass spectrometers.

Sadygov RG, Zhao Y, Haidacher SJ, Starkey JM, Tilton RG, Denner L. Sadygov RG, et al. J Proteome Res. 2010 Aug 6;9(8):4306-12. doi: 10.1021/pr100642q. J Proteome Res. 2010. PMID: 20568695 Free PMC article.

4

SVM model for quality assessment of medium resolution mass spectra from 18O-water labeling experiments.

Nefedov AV, Gilski MJ, Sadygov RG. Nefedov AV, et al. Among authors: sadygov rg. J Proteome Res. 2011 Apr 1;10(4):2095-103. doi: 10.1021/pr1012174. Epub 2011 Feb 23. J Proteome Res. 2011. PMID: 21247216 Free PMC article.

5

Examining troughs in the mass distribution of all theoretically possible tryptic peptides.

Nefedov AV, Mitra I, Brasier AR, Sadygov RG. Nefedov AV, et al. Among authors: sadygov rg. J Proteome Res. 2011 Sep 2;10(9):4150-7. doi: 10.1021/pr2003177. Epub 2011 Aug 9. J Proteome Res. 2011. PMID: 21780838 Free PMC article.

6

Improved mass defect model for theoretical tryptic peptides.

Mitra I, Nefedov AV, Brasier AR, Sadygov RG. Mitra I, et al. Among authors: sadygov rg. Anal Chem. 2012 Mar 20;84(6):3026-32. doi: 10.1021/ac203255e. Epub 2012 Mar 7. Anal Chem. 2012. PMID: 22401145 Free PMC article.

7

Use of theoretical peptide distributions in phosphoproteome analysis.

Kalita M, Kasumov T, Brasier AR, Sadygov RG. Kalita M, et al. Among authors: sadygov rg. J Proteome Res. 2013 Jul 5;12(7):3207-14. doi: 10.1021/pr4003382. Epub 2013 Jun 19. J Proteome Res. 2013. PMID: 23731183 Free PMC article.

8

Using SEQUEST with theoretically complete sequence databases.

Sadygov RG. Sadygov RG. J Am Soc Mass Spectrom. 2015 Nov;26(11):1858-64. doi: 10.1007/s13361-015-1228-5. Epub 2015 Aug 4. J Am Soc Mass Spectrom. 2015. PMID: 26238326 Free PMC article.

9

Poisson Model To Generate Isotope Distribution for Biomolecules.

Sadygov RG. Sadygov RG. J Proteome Res. 2018 Jan 5;17(1):751-758. doi: 10.1021/acs.jproteome.7b00807. Epub 2017 Dec 19. J Proteome Res. 2018. PMID: 29202576 Free PMC article.

10

d2ome, Software for in Vivo Protein Turnover Analysis Using Heavy Water Labeling and LC-MS, Reveals Alterations of Hepatic Proteome Dynamics in a Mouse Model of NAFLD.

Sadygov RG, Avva J, Rahman M, Lee K, Ilchenko S, Kasumov T, Borzou A. Sadygov RG, et al. J Proteome Res. 2018 Nov 2;17(11):3740-3748. doi: 10.1021/acs.jproteome.8b00417. Epub 2018 Oct 19. J Proteome Res. 2018. PMID: 30265007 Free PMC article.

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