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Cross species analysis of microarray expression data.
Lu Y, Huggins P, Bar-Joseph Z. Lu Y, et al. Bioinformatics. 2009 Jun 15;25(12):1476-83. doi: 10.1093/bioinformatics/btp247. Epub 2009 Apr 8. Bioinformatics. 2009. PMID: 19357096 Free PMC article. Review.
CodonBERT large language model for mRNA vaccines.
Li S, Moayedpour S, Li R, Bailey M, Riahi S, Kogler-Anele L, Miladi M, Miner J, Pertuy F, Zheng D, Wang J, Balsubramani A, Tran K, Zacharia M, Wu M, Gu X, Clinton R, Asquith C, Skaleski J, Boeglin L, Chivukula S, Dias A, Strugnell T, Montoya FU, Agarwal V, Bar-Joseph Z, Jager S. Li S, et al. Among authors: bar joseph z. Genome Res. 2024 Aug 20;34(7):1027-1035. doi: 10.1101/gr.278870.123. Genome Res. 2024. PMID: 38951026 Free PMC article.
Analyzing time series gene expression data.
Bar-Joseph Z. Bar-Joseph Z. Bioinformatics. 2004 Nov 1;20(16):2493-503. doi: 10.1093/bioinformatics/bth283. Epub 2004 May 6. Bioinformatics. 2004. PMID: 15130923 Review.
Clustering short time series gene expression data.
Ernst J, Nau GJ, Bar-Joseph Z. Ernst J, et al. Bioinformatics. 2005 Jun;21 Suppl 1:i159-68. doi: 10.1093/bioinformatics/bti1022. Bioinformatics. 2005. PMID: 15961453
162 results