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flowCore: a Bioconductor package for high throughput flow cytometry.
Hahne F, LeMeur N, Brinkman RR, Ellis B, Haaland P, Sarkar D, Spidlen J, Strain E, Gentleman R. Hahne F, et al. Among authors: gentleman r. BMC Bioinformatics. 2009 Apr 9;10:106. doi: 10.1186/1471-2105-10-106. BMC Bioinformatics. 2009. PMID: 19358741 Free PMC article.
Using flowViz to visualize flow cytometry data.
Sarkar D, Le Meur N, Gentleman R. Sarkar D, et al. Among authors: gentleman r. Bioinformatics. 2008 Mar 15;24(6):878-9. doi: 10.1093/bioinformatics/btn021. Epub 2008 Feb 1. Bioinformatics. 2008. PMID: 18245128 Free PMC article.
Data standards for flow cytometry.
Spidlen J, Gentleman RC, Haaland PD, Langille M, Le Meur N, Ochs MF, Schmitt C, Smith CA, Treister AS, Brinkman RR. Spidlen J, et al. Among authors: gentleman rc. OMICS. 2006 Summer;10(2):209-14. doi: 10.1089/omi.2006.10.209. OMICS. 2006. PMID: 16901228 Free PMC article. Review.
Orchestrating high-throughput genomic analysis with Bioconductor.
Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M. Huber W, et al. Among authors: gentleman r. Nat Methods. 2015 Feb;12(2):115-21. doi: 10.1038/nmeth.3252. Nat Methods. 2015. PMID: 25633503 Free PMC article. Review.
Modeling synthetic lethality.
Le Meur N, Gentleman R. Le Meur N, et al. Among authors: gentleman r. Genome Biol. 2008;9(9):R135. doi: 10.1186/gb-2008-9-9-r135. Epub 2008 Sep 12. Genome Biol. 2008. PMID: 18789146 Free PMC article.
Per-channel basis normalization methods for flow cytometry data.
Hahne F, Khodabakhshi AH, Bashashati A, Wong CJ, Gascoyne RD, Weng AP, Seyfert-Margolis V, Bourcier K, Asare A, Lumley T, Gentleman R, Brinkman RR. Hahne F, et al. Among authors: gentleman r. Cytometry A. 2010 Feb;77(2):121-31. doi: 10.1002/cyto.a.20823. Cytometry A. 2010. PMID: 19899135 Free PMC article.
86 results