Kristiansson E - Search Results

1

The ITS region as a target for characterization of fungal communities using emerging sequencing technologies.

Nilsson RH, Ryberg M, Abarenkov K, Sjökvist E, Kristiansson E. Nilsson RH, et al. Among authors: kristiansson e. FEMS Microbiol Lett. 2009 Jul;296(1):97-101. doi: 10.1111/j.1574-6968.2009.01618.x. Epub 2009 May 1. FEMS Microbiol Lett. 2009. PMID: 19459974

2

Extensive screening reveals previously undiscovered aminoglycoside resistance genes in human pathogens.

Lund D, Coertze RD, Parras-Moltó M, Berglund F, Flach CF, Johnning A, Larsson DGJ, Kristiansson E. Lund D, et al. Among authors: kristiansson e. Commun Biol. 2023 Aug 3;6(1):812. doi: 10.1038/s42003-023-05174-6. Commun Biol. 2023. PMID: 37537271 Free PMC article.

3

Strain-level bacterial typing directly from patient samples using optical DNA mapping.

Nyblom M, Johnning A, Frykholm K, Wrande M, Müller V, Goyal G, Robertsson M, Dvirnas A, Sewunet T, Kk S, Ambjörnsson T, Giske CG, Sandegren L, Kristiansson E, Westerlund F. Nyblom M, et al. Among authors: kristiansson e. Commun Med (Lond). 2023 Feb 23;3(1):31. doi: 10.1038/s43856-023-00259-z. Commun Med (Lond). 2023. PMID: 36823379 Free PMC article.

4

Approaching the taxonomic affiliation of unidentified sequences in public databases--an example from the mycorrhizal fungi.

Nilsson RH, Kristiansson E, Ryberg M, Larsson KH. Nilsson RH, et al. Among authors: kristiansson e. BMC Bioinformatics. 2005 Jul 18;6:178. doi: 10.1186/1471-2105-6-178. BMC Bioinformatics. 2005. PMID: 16022740 Free PMC article.

5

Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective.

Nilsson RH, Ryberg M, Kristiansson E, Abarenkov K, Larsson KH, Kõljalg U. Nilsson RH, et al. Among authors: kristiansson e. PLoS One. 2006 Dec 20;1(1):e59. doi: 10.1371/journal.pone.0000059. PLoS One. 2006. PMID: 17183689 Free PMC article.

6

Mining metadata from unidentified ITS sequences in GenBank: a case study in Inocybe (Basidiomycota).

Ryberg M, Nilsson RH, Kristiansson E, Töpel M, Jacobsson S, Larsson E. Ryberg M, et al. Among authors: kristiansson e. BMC Evol Biol. 2008 Feb 18;8:50. doi: 10.1186/1471-2148-8-50. BMC Evol Biol. 2008. PMID: 18282272 Free PMC article.

7

An outlook on the fungal internal transcribed spacer sequences in GenBank and the introduction of a web-based tool for the exploration of fungal diversity.

Ryberg M, Kristiansson E, Sjökvist E, Nilsson RH. Ryberg M, et al. Among authors: kristiansson e. New Phytol. 2009 Jan;181(2):471-477. doi: 10.1111/j.1469-8137.2008.02667.x. New Phytol. 2009. PMID: 19121041 Free article.

8

A software pipeline for processing and identification of fungal ITS sequences.

Nilsson RH, Bok G, Ryberg M, Kristiansson E, Hallenberg N. Nilsson RH, et al. Among authors: kristiansson e. Source Code Biol Med. 2009 Jan 15;4:1. doi: 10.1186/1751-0473-4-1. Source Code Biol Med. 2009. PMID: 19146660 Free PMC article.

9

Intraspecific ITS variability in the kingdom fungi as expressed in the international sequence databases and its implications for molecular species identification.

Nilsson RH, Kristiansson E, Ryberg M, Hallenberg N, Larsson KH. Nilsson RH, et al. Among authors: kristiansson e. Evol Bioinform Online. 2008 May 26;4:193-201. doi: 10.4137/ebo.s653. Evol Bioinform Online. 2008. PMID: 19204817 Free PMC article.

10

An open source chimera checker for the fungal ITS region.

Nilsson RH, Abarenkov K, Veldre V, Nylinder S, DE Wit P, Brosché S, Alfredsson JF, Ryberg M, Kristiansson E. Nilsson RH, et al. Among authors: kristiansson e. Mol Ecol Resour. 2010 Nov;10(6):1076-81. doi: 10.1111/j.1755-0998.2010.02850.x. Mol Ecol Resour. 2010. PMID: 21565119

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