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Stable structure-approximating inverse protein folding in 2D hydrophobic-polar-cysteine (HPC) model.
Khodabakhshi AH, Manuch J, Rafiey A, Gupta A. Khodabakhshi AH, et al. Among authors: gupta a. J Comput Biol. 2009 Jan;16(1):19-30. doi: 10.1089/cmb.2008.0096. J Comput Biol. 2009. PMID: 19072580
Gupta et al. (2005) introduced a design in the two-dimensional (2D) hydrophobic-polar (HP) model of Dill that can be used to approximate any given (2D) shape. ...We call this model the HPC model. We consider a subclass of linear structures designed in Gupt …
Gupta et al. (2005) introduced a design in the two-dimensional (2D) hydrophobic-polar (HP) model of Dill that can be used to a …
Algorithm for haplotype inference via galled-tree networks with simple galls.
Gupta A, Maňuch J, Stacho L, Zhao X. Gupta A, et al. J Comput Biol. 2012 Apr;19(4):439-54. doi: 10.1089/cmb.2010.0145. J Comput Biol. 2012. PMID: 22468709
Recently, Song et al. ( 2005 ) studied the two cases: haplotyping via imperfect phylogenies with a single homoplasy and via galled-tree networks with one gall. In Gupta et al. ( 2010 ), we have shown that the haplotyping via galled-tree networks is NP-hard, even if …
Recently, Song et al. ( 2005 ) studied the two cases: haplotyping via imperfect phylogenies with a single homoplasy and via galled-tr …
Prediction of 492 human protein kinase substrate specificities.
Safaei J, Maňuch J, Gupta A, Stacho L, Pelech S. Safaei J, et al. Among authors: gupta a. Proteome Sci. 2011 Oct 14;9 Suppl 1(Suppl 1):S6. doi: 10.1186/1477-5956-9-S1-S6. Proteome Sci. 2011. PMID: 22165948 Free PMC article.
Critical assessment of automated flow cytometry data analysis techniques.
Aghaeepour N, Finak G; FlowCAP Consortium; DREAM Consortium; Hoos H, Mosmann TR, Brinkman R, Gottardo R, Scheuermann RH. Aghaeepour N, et al. Nat Methods. 2013 Mar;10(3):228-38. doi: 10.1038/nmeth.2365. Epub 2013 Feb 10. Nat Methods. 2013. PMID: 23396282 Free PMC article.
20,494 results
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