Schug A - Search Results

1

Robustness and generalization of structure-based models for protein folding and function.

Lammert H, Schug A, Onuchic JN. Lammert H, et al. Among authors: schug a. Proteins. 2009 Dec;77(4):881-91. doi: 10.1002/prot.22511. Proteins. 2009. PMID: 19626713

2

Mirror images as naturally competing conformations in protein folding.

Noel JK, Schug A, Verma A, Wenzel W, Garcia AE, Onuchic JN. Noel JK, et al. Among authors: schug a. J Phys Chem B. 2012 Jun 14;116(23):6880-8. doi: 10.1021/jp212623d. Epub 2012 Apr 26. J Phys Chem B. 2012. PMID: 22497217

3

Constructing a folding model for protein S6 guided by native fluctuations deduced from NMR structures.

Lammert H, Noel JK, Haglund E, Schug A, Onuchic JN. Lammert H, et al. Among authors: schug a. J Chem Phys. 2015 Dec 28;143(24):243141. doi: 10.1063/1.4936881. J Chem Phys. 2015. PMID: 26723626

4

Mutations as trapdoors to two competing native conformations of the Rop-dimer.

Schug A, Whitford PC, Levy Y, Onuchic JN. Schug A, et al. Proc Natl Acad Sci U S A. 2007 Nov 6;104(45):17674-9. doi: 10.1073/pnas.0706077104. Epub 2007 Oct 29. Proc Natl Acad Sci U S A. 2007. PMID: 17968016 Free PMC article.

5

Geometrical features of the protein folding mechanism are a robust property of the energy landscape: a detailed investigation of several reduced models.

Oliveira LC, Schug A, Onuchic JN. Oliveira LC, et al. Among authors: schug a. J Phys Chem B. 2008 May 15;112(19):6131-6. doi: 10.1021/jp0769835. Epub 2008 Feb 6. J Phys Chem B. 2008. PMID: 18251535

6

An all-atom structure-based potential for proteins: bridging minimal models with all-atom empirical forcefields.

Whitford PC, Noel JK, Gosavi S, Schug A, Sanbonmatsu KY, Onuchic JN. Whitford PC, et al. Among authors: schug a. Proteins. 2009 May 1;75(2):430-41. doi: 10.1002/prot.22253. Proteins. 2009. PMID: 18837035 Free PMC article.

7

Direct single-molecule observation of a protein living in two opposed native structures.

Gambin Y, Schug A, Lemke EA, Lavinder JJ, Ferreon AC, Magliery TJ, Onuchic JN, Deniz AA. Gambin Y, et al. Among authors: schug a. Proc Natl Acad Sci U S A. 2009 Jun 23;106(25):10153-8. doi: 10.1073/pnas.0904461106. Epub 2009 Jun 8. Proc Natl Acad Sci U S A. 2009. PMID: 19506258 Free PMC article.

8

Integrating molecular dynamics simulations with chemical probing experiments using SHAPE-FIT.

Kirmizialtin S, Hennelly SP, Schug A, Onuchic JN, Sanbonmatsu KY. Kirmizialtin S, et al. Among authors: schug a. Methods Enzymol. 2015;553:215-34. doi: 10.1016/bs.mie.2014.10.061. Epub 2015 Feb 7. Methods Enzymol. 2015. PMID: 25726467 Free PMC article.

9

High-resolution protein complexes from integrating genomic information with molecular simulation.

Schug A, Weigt M, Onuchic JN, Hwa T, Szurmant H. Schug A, et al. Proc Natl Acad Sci U S A. 2009 Dec 29;106(52):22124-9. doi: 10.1073/pnas.0912100106. Epub 2009 Dec 17. Proc Natl Acad Sci U S A. 2009. PMID: 20018738 Free PMC article.

10

Computational modeling of phosphotransfer complexes in two-component signaling.

Schug A, Weigt M, Hoch JA, Onuchic JN, Hwa T, Szurmant H. Schug A, et al. Methods Enzymol. 2010;471:43-58. doi: 10.1016/S0076-6879(10)71003-X. Epub 2010 Mar 1. Methods Enzymol. 2010. PMID: 20946841

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