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Evaluation of a new high-dimensional miRNA profiling platform.
Cunningham JM, Oberg AL, Borralho PM, Kren BT, French AJ, Wang L, Bot BM, Morlan BW, Silverstein KA, Staggs R, Zeng Y, Lamblin AF, Hilker CA, Fan JB, Steer CJ, Thibodeau SN. Cunningham JM, et al. Among authors: silverstein ka. BMC Med Genomics. 2009 Aug 27;2:57. doi: 10.1186/1755-8794-2-57. BMC Med Genomics. 2009. PMID: 19712457 Free PMC article.
Human colon cancer profiles show differential microRNA expression depending on mismatch repair status and are characteristic of undifferentiated proliferative states.
Sarver AL, French AJ, Borralho PM, Thayanithy V, Oberg AL, Silverstein KA, Morlan BW, Riska SM, Boardman LA, Cunningham JM, Subramanian S, Wang L, Smyrk TC, Rodrigues CM, Thibodeau SN, Steer CJ. Sarver AL, et al. Among authors: silverstein ka. BMC Cancer. 2009 Nov 18;9:401. doi: 10.1186/1471-2407-9-401. BMC Cancer. 2009. PMID: 19922656 Free PMC article.
A transposon-based genetic screen in mice identifies genes altered in colorectal cancer.
Starr TK, Allaei R, Silverstein KA, Staggs RA, Sarver AL, Bergemann TL, Gupta M, O'Sullivan MG, Matise I, Dupuy AJ, Collier LS, Powers S, Oberg AL, Asmann YW, Thibodeau SN, Tessarollo L, Copeland NG, Jenkins NA, Cormier RT, Largaespada DA. Starr TK, et al. Among authors: silverstein ka. Science. 2009 Mar 27;323(5922):1747-50. doi: 10.1126/science.1163040. Epub 2009 Feb 26. Science. 2009. PMID: 19251594 Free PMC article.
Hybrid assembly with long and short reads improves discovery of gene family expansions.
Miller JR, Zhou P, Mudge J, Gurtowski J, Lee H, Ramaraj T, Walenz BP, Liu J, Stupar RM, Denny R, Song L, Singh N, Maron LG, McCouch SR, McCombie WR, Schatz MC, Tiffin P, Young ND, Silverstein KAT. Miller JR, et al. BMC Genomics. 2017 Jul 19;18(1):541. doi: 10.1186/s12864-017-3927-8. BMC Genomics. 2017. PMID: 28724409 Free PMC article.
SHEAR: sample heterogeneity estimation and assembly by reference.
Landman SR, Hwang TH, Silverstein KA, Li Y, Dehm SM, Steinbach M, Kumar V. Landman SR, et al. Among authors: silverstein ka. BMC Genomics. 2014 Jan 29;15(1):84. doi: 10.1186/1471-2164-15-84. BMC Genomics. 2014. PMID: 24476358 Free PMC article.
87 results