Izarzugaza JM - Search Results

1

Assessment of domain boundary predictions and the prediction of intramolecular contacts in CASP8.

Ezkurdia I, Graña O, Izarzugaza JM, Tress ML. Ezkurdia I, et al. Among authors: izarzugaza jm. Proteins. 2009;77 Suppl 9:196-209. doi: 10.1002/prot.22554. Proteins. 2009. PMID: 19714769

2

Assessment of intramolecular contact predictions for CASP7.

Izarzugaza JM, Graña O, Tress ML, Valencia A, Clarke ND. Izarzugaza JM, et al. Proteins. 2007;69 Suppl 8:152-8. doi: 10.1002/prot.21637. Proteins. 2007. PMID: 17671976

3

Cancer-associated mutations are preferentially distributed in protein kinase functional sites.

Izarzugaza JM, Redfern OC, Orengo CA, Valencia A. Izarzugaza JM, et al. Proteins. 2009 Dec;77(4):892-903. doi: 10.1002/prot.22512. Proteins. 2009. PMID: 19626714

4

KinMutRF: a random forest classifier of sequence variants in the human protein kinase superfamily.

Pons T, Vazquez M, Matey-Hernandez ML, Brunak S, Valencia A, Izarzugaza JM. Pons T, et al. Among authors: izarzugaza jm. BMC Genomics. 2016 Jun 23;17 Suppl 2(Suppl 2):396. doi: 10.1186/s12864-016-2723-1. BMC Genomics. 2016. PMID: 27357839 Free PMC article.

5

From cancer genomes to cancer models: bridging the gaps.

Baudot A, Real FX, Izarzugaza JM, Valencia A. Baudot A, et al. Among authors: izarzugaza jm. EMBO Rep. 2009 Apr;10(4):359-66. doi: 10.1038/embor.2009.46. Epub 2009 Mar 20. EMBO Rep. 2009. PMID: 19305388 Free PMC article. Review.

6

Characterization of pathogenic germline mutations in human protein kinases.

Izarzugaza JM, Hopcroft LE, Baresic A, Orengo CA, Martin AC, Valencia A. Izarzugaza JM, et al. BMC Bioinformatics. 2011;12 Suppl 4(Suppl 4):S1. doi: 10.1186/1471-2105-12-S4-S1. Epub 2011 Jul 5. BMC Bioinformatics. 2011. PMID: 21992016 Free PMC article.

7

An integrated approach to the interpretation of single amino acid polymorphisms within the framework of CATH and Gene3D.

Izarzugaza JM, Baresic A, McMillan LE, Yeats C, Clegg AB, Orengo CA, Martin AC, Valencia A. Izarzugaza JM, et al. BMC Bioinformatics. 2009 Aug 27;10 Suppl 8(Suppl 8):S5. doi: 10.1186/1471-2105-10-S8-S5. BMC Bioinformatics. 2009. PMID: 19758469 Free PMC article.

8

wKinMut: an integrated tool for the analysis and interpretation of mutations in human protein kinases.

Izarzugaza JM, Vazquez M, del Pozo A, Valencia A. Izarzugaza JM, et al. BMC Bioinformatics. 2013 Nov 29;14:345. doi: 10.1186/1471-2105-14-345. BMC Bioinformatics. 2013. PMID: 24289158 Free PMC article.

9

wKinMut-2: Identification and Interpretation of Pathogenic Variants in Human Protein Kinases.

Vazquez M, Pons T, Brunak S, Valencia A, Izarzugaza JM. Vazquez M, et al. Among authors: izarzugaza jm. Hum Mutat. 2016 Jan;37(1):36-42. doi: 10.1002/humu.22914. Epub 2015 Oct 20. Hum Mutat. 2016. PMID: 26443060

10

Extraction of human kinase mutations from literature, databases and genotyping studies.

Krallinger M, Izarzugaza JM, Rodriguez-Penagos C, Valencia A. Krallinger M, et al. Among authors: izarzugaza jm. BMC Bioinformatics. 2009 Aug 27;10 Suppl 8(Suppl 8):S1. doi: 10.1186/1471-2105-10-S8-S1. BMC Bioinformatics. 2009. PMID: 19758464 Free PMC article.

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