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CASD-NMR: critical assessment of automated structure determination by NMR.
Rosato A, Bagaria A, Baker D, Bardiaux B, Cavalli A, Doreleijers JF, Giachetti A, Guerry P, Güntert P, Herrmann T, Huang YJ, Jonker HR, Mao B, Malliavin TE, Montelione GT, Nilges M, Raman S, van der Schot G, Vranken WF, Vuister GW, Bonvin AM. Rosato A, et al. Among authors: vuister gw. Nat Methods. 2009 Sep;6(9):625-6. doi: 10.1038/nmeth0909-625. Nat Methods. 2009. PMID: 19718014 Free PMC article. No abstract available.
The precision of NMR structure ensembles revisited.
Spronk CA, Nabuurs SB, Bonvin AM, Krieger E, Vuister GW, Vriend G. Spronk CA, et al. Among authors: vuister gw. J Biomol NMR. 2003 Mar;25(3):225-34. doi: 10.1023/a:1022819716110. J Biomol NMR. 2003. PMID: 12652134
DRESS: a database of REfined solution NMR structures.
Nabuurs SB, Nederveen AJ, Vranken W, Doreleijers JF, Bonvin AM, Vuister GW, Vriend G, Spronk CA. Nabuurs SB, et al. Among authors: vuister gw. Proteins. 2004 May 15;55(3):483-6. doi: 10.1002/prot.20118. Proteins. 2004. PMID: 15103611
The NMR restraints grid at BMRB for 5,266 protein and nucleic acid PDB entries.
Doreleijers JF, Vranken WF, Schulte C, Lin J, Wedell JR, Penkett CJ, Vuister GW, Vriend G, Markley JL, Ulrich EL. Doreleijers JF, et al. Among authors: vuister gw. J Biomol NMR. 2009 Dec;45(4):389-96. doi: 10.1007/s10858-009-9378-z. Epub 2009 Oct 7. J Biomol NMR. 2009. PMID: 19809795 Free PMC article.
Overview on the use of NMR to examine protein structure.
Breukels V, Konijnenberg A, Nabuurs SM, Doreleijers JF, Kovalevskaya NV, Vuister GW. Breukels V, et al. Among authors: vuister gw. Curr Protoc Protein Sci. 2011 Apr;Chapter 17:Unit17.5. doi: 10.1002/0471140864.ps1705s64. Curr Protoc Protein Sci. 2011. PMID: 21488042
Blind testing of routine, fully automated determination of protein structures from NMR data.
Rosato A, Aramini JM, Arrowsmith C, Bagaria A, Baker D, Cavalli A, Doreleijers JF, Eletsky A, Giachetti A, Guerry P, Gutmanas A, Güntert P, He Y, Herrmann T, Huang YJ, Jaravine V, Jonker HR, Kennedy MA, Lange OF, Liu G, Malliavin TE, Mani R, Mao B, Montelione GT, Nilges M, Rossi P, van der Schot G, Schwalbe H, Szyperski TA, Vendruscolo M, Vernon R, Vranken WF, Vries Sd, Vuister GW, Wu B, Yang Y, Bonvin AM. Rosato A, et al. Among authors: vuister gw. Structure. 2012 Feb 8;20(2):227-36. doi: 10.1016/j.str.2012.01.002. Structure. 2012. PMID: 22325772 Free PMC article.
CING: an integrated residue-based structure validation program suite.
Doreleijers JF, Sousa da Silva AW, Krieger E, Nabuurs SB, Spronk CA, Stevens TJ, Vranken WF, Vriend G, Vuister GW. Doreleijers JF, et al. Among authors: vuister gw. J Biomol NMR. 2012 Nov;54(3):267-83. doi: 10.1007/s10858-012-9669-7. Epub 2012 Sep 18. J Biomol NMR. 2012. PMID: 22986687 Free PMC article.
100 results