De Paepe A - Search Results

1

RNA pre-amplification enables large-scale RT-qPCR gene-expression studies on limiting sample amounts.

Vermeulen J, Derveaux S, Lefever S, De Smet E, De Preter K, Yigit N, De Paepe A, Pattyn F, Speleman F, Vandesompele J. Vermeulen J, et al. Among authors: de paepe a, de smet e, de preter k. BMC Res Notes. 2009 Nov 25;2:235. doi: 10.1186/1756-0500-2-235. BMC Res Notes. 2009. PMID: 19930725 Free PMC article.

2

Combined subtractive cDNA cloning and array CGH: an efficient approach for identification of overexpressed genes in DNA amplicons.

De Preter K, Pattyn F, Berx G, Strumane K, Menten B, Van Roy F, De Paepe A, Speleman F, Vandesompele J. De Preter K, et al. Among authors: de paepe a. BMC Genomics. 2004 Feb 3;5(1):11. doi: 10.1186/1471-2164-5-11. BMC Genomics. 2004. PMID: 15018647 Free PMC article.

3

No evidence for involvement of SDHD in neuroblastoma pathogenesis.

De Preter K, Vandesompele J, Hoebeeck J, Vandenbroecke C, Smet J, Nuyts A, Laureys G, Combaret V, Van Roy N, Roels F, Van Coster R, Praet M, De Paepe A, Speleman F. De Preter K, et al. Among authors: de paepe a. BMC Cancer. 2004 Aug 24;4:55. doi: 10.1186/1471-2407-4-55. BMC Cancer. 2004. PMID: 15331017 Free PMC article.

4

arrayCGHbase: an analysis platform for comparative genomic hybridization microarrays.

Menten B, Pattyn F, De Preter K, Robbrecht P, Michels E, Buysse K, Mortier G, De Paepe A, van Vooren S, Vermeesch J, Moreau Y, De Moor B, Vermeulen S, Speleman F, Vandesompele J. Menten B, et al. Among authors: de paepe a, de preter k, de moor b. BMC Bioinformatics. 2005 May 23;6:124. doi: 10.1186/1471-2105-6-124. BMC Bioinformatics. 2005. PMID: 15910681 Free PMC article.

5

The von Hippel-Lindau tumor suppressor gene expression level has prognostic value in neuroblastoma.

Hoebeeck J, Vandesompele J, Nilsson H, De Preter K, Van Roy N, De Smet E, Yigit N, De Paepe A, Laureys G, Påhlman S, Speleman F. Hoebeeck J, et al. Among authors: de paepe a, de preter k, de smet e. Int J Cancer. 2006 Aug 1;119(3):624-9. doi: 10.1002/ijc.21888. Int J Cancer. 2006. PMID: 16506218

6

methBLAST and methPrimerDB: web-tools for PCR based methylation analysis.

Pattyn F, Hoebeeck J, Robbrecht P, Michels E, De Paepe A, Bottu G, Coornaert D, Herzog R, Speleman F, Vandesompele J. Pattyn F, et al. Among authors: de paepe a. BMC Bioinformatics. 2006 Nov 9;7:496. doi: 10.1186/1471-2105-7-496. BMC Bioinformatics. 2006. PMID: 17094804 Free PMC article.

7

CADM1 is a strong neuroblastoma candidate gene that maps within a 3.72 Mb critical region of loss on 11q23.

Michels E, Hoebeeck J, De Preter K, Schramm A, Brichard B, De Paepe A, Eggert A, Laureys G, Vandesompele J, Speleman F. Michels E, et al. Among authors: de paepe a, de preter k. BMC Cancer. 2008 Jun 17;8:173. doi: 10.1186/1471-2407-8-173. BMC Cancer. 2008. PMID: 18559103 Free PMC article.

8

Aberrant methylation of candidate tumor suppressor genes in neuroblastoma.

Hoebeeck J, Michels E, Pattyn F, Combaret V, Vermeulen J, Yigit N, Hoyoux C, Laureys G, De Paepe A, Speleman F, Vandesompele J. Hoebeeck J, et al. Among authors: de paepe a. Cancer Lett. 2009 Jan 18;273(2):336-46. doi: 10.1016/j.canlet.2008.08.019. Epub 2008 Sep 25. Cancer Lett. 2009. PMID: 18819746

9

Expressed repeat elements improve RT-qPCR normalization across a wide range of zebrafish gene expression studies.

Vanhauwaert S, Van Peer G, Rihani A, Janssens E, Rondou P, Lefever S, De Paepe A, Coucke PJ, Speleman F, Vandesompele J, Willaert A. Vanhauwaert S, et al. Among authors: de paepe a. PLoS One. 2014 Oct 13;9(10):e109091. doi: 10.1371/journal.pone.0109091. eCollection 2014. PLoS One. 2014. PMID: 25310091 Free PMC article.

10

RT-qPCR gene expression analysis in zebrafish: Preanalytical precautions and use of expressed repetitive elements for normalization.

Vanhauwaert S, Lefever S, Coucke P, Speleman F, De Paepe A, Vandesompele J, Willaert A. Vanhauwaert S, et al. Among authors: de paepe a. Methods Cell Biol. 2016;135:329-42. doi: 10.1016/bs.mcb.2016.02.002. Epub 2016 Mar 4. Methods Cell Biol. 2016. PMID: 27443934

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