Gumbart J - Search Results

1

Structure of monomeric yeast and mammalian Sec61 complexes interacting with the translating ribosome.

Becker T, Bhushan S, Jarasch A, Armache JP, Funes S, Jossinet F, Gumbart J, Mielke T, Berninghausen O, Schulten K, Westhof E, Gilmore R, Mandon EC, Beckmann R. Becker T, et al. Among authors: gumbart j. Science. 2009 Dec 4;326(5958):1369-73. doi: 10.1126/science.1178535. Epub 2009 Oct 29. Science. 2009. PMID: 19933108 Free PMC article.

2

Species-agnostic polymeric formulations for inhalable messenger RNA delivery to the lung.

Rotolo L, Vanover D, Bruno NC, Peck HE, Zurla C, Murray J, Noel RK, O'Farrell L, Araínga M, Orr-Burks N, Joo JY, Chaves LCS, Jung Y, Beyersdorf J, Gumber S, Guerrero-Ferreira R, Cornejo S, Thoresen M, Olivier AK, Kuo KM, Gumbart JC, Woolums AR, Villinger F, Lafontaine ER, Hogan RJ, Finn MG, Santangelo PJ. Rotolo L, et al. Among authors: gumbart jc. Nat Mater. 2023 Mar;22(3):369-379. doi: 10.1038/s41563-022-01404-0. Epub 2022 Nov 28. Nat Mater. 2023. PMID: 36443576

3

SARS-CoV-2 spike opening dynamics and energetics reveal the individual roles of glycans and their collective impact.

Pang YT, Acharya A, Lynch DL, Pavlova A, Gumbart JC. Pang YT, et al. Commun Biol. 2022 Nov 3;5(1):1170. doi: 10.1038/s42003-022-04138-6. Commun Biol. 2022. PMID: 36329138 Free PMC article.

4

Understanding Virus Structure and Dynamics through Molecular Simulations.

Lynch DL, Pavlova A, Fan Z, Gumbart JC. Lynch DL, et al. J Chem Theory Comput. 2023 Jun 13;19(11):3025-3036. doi: 10.1021/acs.jctc.3c00116. Epub 2023 May 16. J Chem Theory Comput. 2023. PMID: 37192279 Free PMC article. Review.

5

Molecular dynamics simulations of proteins in lipid bilayers.

Gumbart J, Wang Y, Aksimentiev A, Tajkhorshid E, Schulten K. Gumbart J, et al. Curr Opin Struct Biol. 2005 Aug;15(4):423-31. doi: 10.1016/j.sbi.2005.07.007. Curr Opin Struct Biol. 2005. PMID: 16043343 Free PMC article. Review.

6

Molecular dynamics studies of the archaeal translocon.

Gumbart J, Schulten K. Gumbart J, et al. Biophys J. 2006 Apr 1;90(7):2356-67. doi: 10.1529/biophysj.105.075291. Epub 2006 Jan 13. Biophys J. 2006. PMID: 16415058 Free PMC article.

7

Structural determinants of lateral gate opening in the protein translocon.

Gumbart J, Schulten K. Gumbart J, et al. Biochemistry. 2007 Oct 2;46(39):11147-57. doi: 10.1021/bi700835d. Epub 2007 Aug 31. Biochemistry. 2007. PMID: 17760424 Free article.

8

Intrinsic curvature properties of photosynthetic proteins in chromatophores.

Chandler DE, Hsin J, Harrison CB, Gumbart J, Schulten K. Chandler DE, et al. Among authors: gumbart j. Biophys J. 2008 Sep 15;95(6):2822-36. doi: 10.1529/biophysj.108.132852. Epub 2008 May 30. Biophys J. 2008. PMID: 18515401 Free PMC article.

9

The roles of pore ring and plug in the SecY protein-conducting channel.

Gumbart J, Schulten K. Gumbart J, et al. J Gen Physiol. 2008 Dec;132(6):709-19. doi: 10.1085/jgp.200810062. Epub 2008 Nov 10. J Gen Physiol. 2008. PMID: 19001142 Free PMC article.

10

Molecular dynamics simulations of membrane channels and transporters.

Khalili-Araghi F, Gumbart J, Wen PC, Sotomayor M, Tajkhorshid E, Schulten K. Khalili-Araghi F, et al. Among authors: gumbart j. Curr Opin Struct Biol. 2009 Apr;19(2):128-37. doi: 10.1016/j.sbi.2009.02.011. Epub 2009 Apr 1. Curr Opin Struct Biol. 2009. PMID: 19345092 Free PMC article. Review.

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