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Page 1
Impact of genome reduction on bacterial metabolism and its regulation.
Yus E, Maier T, Michalodimitrakis K, van Noort V, Yamada T, Chen WH, Wodke JA, Güell M, Martínez S, Bourgeois R, Kühner S, Raineri E, Letunic I, Kalinina OV, Rode M, Herrmann R, Gutiérrez-Gallego R, Russell RB, Gavin AC, Bork P, Serrano L. Yus E, et al. Among authors: letunic i. Science. 2009 Nov 27;326(5957):1263-8. doi: 10.1126/science.1177263. Science. 2009. PMID: 19965476
InterPro in 2022.
Paysan-Lafosse T, Blum M, Chuguransky S, Grego T, Pinto BL, Salazar GA, Bileschi ML, Bork P, Bridge A, Colwell L, Gough J, Haft DH, Letunić I, Marchler-Bauer A, Mi H, Natale DA, Orengo CA, Pandurangan AP, Rivoire C, Sigrist CJA, Sillitoe I, Thanki N, Thomas PD, Tosatto SCE, Wu CH, Bateman A. Paysan-Lafosse T, et al. Among authors: letunic i. Nucleic Acids Res. 2023 Jan 6;51(D1):D418-D427. doi: 10.1093/nar/gkac993. Nucleic Acids Res. 2023. PMID: 36350672 Free PMC article.
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.
Rheinbay E, Nielsen MM, Abascal F, Wala JA, Shapira O, Tiao G, Hornshøj H, Hess JM, Juul RI, Lin Z, Feuerbach L, Sabarinathan R, Madsen T, Kim J, Mularoni L, Shuai S, Lanzós A, Herrmann C, Maruvka YE, Shen C, Amin SB, Bandopadhayay P, Bertl J, Boroevich KA, Busanovich J, Carlevaro-Fita J, Chakravarty D, Chan CWY, Craft D, Dhingra P, Diamanti K, Fonseca NA, Gonzalez-Perez A, Guo Q, Hamilton MP, Haradhvala NJ, Hong C, Isaev K, Johnson TA, Juul M, Kahles A, Kahraman A, Kim Y, Komorowski J, Kumar K, Kumar S, Lee D, Lehmann KV, Li Y, Liu EM, Lochovsky L, Park K, Pich O, Roberts ND, Saksena G, Schumacher SE, Sidiropoulos N, Sieverling L, Sinnott-Armstrong N, Stewart C, Tamborero D, Tubio JMC, Umer HM, Uusküla-Reimand L, Wadelius C, Wadi L, Yao X, Zhang CZ, Zhang J, Haber JE, Hobolth A, Imielinski M, Kellis M, Lawrence MS, von Mering C, Nakagawa H, Raphael BJ, Rubin MA, Sander C, Stein LD, Stuart JM, Tsunoda T, Wheeler DA, Johnson R, Reimand J, Gerstein M, Khurana E, Campbell PJ, López-Bigas N; PCAWG Drivers and Functional Interpretation Working Group; PCAWG Structural Variation Working Group; Weischenfeldt J, Beroukhim R, Martincorena I, Pedersen JS, Getz G; PCAWG Consortium. Rheinbay E, et al. Nature. 2020 Feb;578(7793):102-111. doi: 10.1038/s41586-020-1965-x. Epub 2020 Feb 5. Nature. 2020. PMID: 32025015 Free PMC article.
Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide.
Andrikopoulos P, Aron-Wisnewsky J, Chakaroun R, Myridakis A, Forslund SK, Nielsen T, Adriouch S, Holmes B, Chilloux J, Vieira-Silva S, Falony G, Salem JE, Andreelli F, Belda E, Kieswich J, Chechi K, Puig-Castellvi F, Chevalier M, Le Chatelier E, Olanipekun MT, Hoyles L, Alves R, Helft G, Isnard R, Køber L, Coelho LP, Rouault C, Gauguier D, Gøtze JP, Prifti E, Froguel P; MetaCardis Consortium; Zucker JD, Bäckhed F, Vestergaard H, Hansen T, Oppert JM, Blüher M, Nielsen J, Raes J, Bork P, Yaqoob MM, Stumvoll M, Pedersen O, Ehrlich SD, Clément K, Dumas ME. Andrikopoulos P, et al. Nat Commun. 2023 Sep 20;14(1):5843. doi: 10.1038/s41467-023-39824-4. Nat Commun. 2023. PMID: 37730687 Free PMC article.
Genome and protein evolution in eukaryotes.
Copley RR, Letunic I, Bork P. Copley RR, et al. Among authors: letunic i. Curr Opin Chem Biol. 2002 Feb;6(1):39-45. doi: 10.1016/s1367-5931(01)00278-2. Curr Opin Chem Biol. 2002. PMID: 11827821 Review.
Protein domain analysis in the era of complete genomes.
Copley RR, Doerks T, Letunic I, Bork P. Copley RR, et al. Among authors: letunic i. FEBS Lett. 2002 Feb 20;513(1):129-34. doi: 10.1016/s0014-5793(01)03289-6. FEBS Lett. 2002. PMID: 11911892 Free article. Review.
Alternative splicing and evolution.
Boue S, Letunic I, Bork P. Boue S, et al. Among authors: letunic i. Bioessays. 2003 Nov;25(11):1031-4. doi: 10.1002/bies.10371. Bioessays. 2003. PMID: 14579243 Review.
Consistency of genome-based methods in measuring Metazoan evolution.
Zdobnov EM, von Mering C, Letunic I, Bork P. Zdobnov EM, et al. Among authors: letunic i. FEBS Lett. 2005 Jun 13;579(15):3355-61. doi: 10.1016/j.febslet.2005.04.006. Epub 2005 Apr 18. FEBS Lett. 2005. PMID: 15943981 Free article. Review.
125 results