Lupyan D - Search Results

1

A molecular dynamics investigation of lipid bilayer perturbation by PIP2.

Lupyan D, Mezei M, Logothetis DE, Osman R. Lupyan D, et al. Biophys J. 2010 Jan 20;98(2):240-7. doi: 10.1016/j.bpj.2009.09.063. Biophys J. 2010. PMID: 20338845 Free PMC article.

2

Diverse Kir modulators act in close proximity to residues implicated in phosphoinositide binding.

Logothetis DE, Lupyan D, Rosenhouse-Dantsker A. Logothetis DE, et al. Among authors: lupyan d. J Physiol. 2007 Aug 1;582(Pt 3):953-65. doi: 10.1113/jphysiol.2007.133157. Epub 2007 May 10. J Physiol. 2007. PMID: 17495041 Free PMC article. Review.

3

Phosphoinositide-mediated gating of inwardly rectifying K(+) channels.

Logothetis DE, Jin T, Lupyan D, Rosenhouse-Dantsker A. Logothetis DE, et al. Among authors: lupyan d. Pflugers Arch. 2007 Oct;455(1):83-95. doi: 10.1007/s00424-007-0276-5. Epub 2007 May 23. Pflugers Arch. 2007. PMID: 17520276 Review.

4

Effective mast cell degranulating peptide inhibitors of the IgE/Fc epsilonRI receptor interaction.

Buku A, Keselman I, Lupyan D, Mezei M, Price JA. Buku A, et al. Among authors: lupyan d. Chem Biol Drug Des. 2008 Aug;72(2):133-9. doi: 10.1111/j.1747-0285.2008.00684.x. Epub 2008 Jul 10. Chem Biol Drug Des. 2008. PMID: 18624811

5

Improving the Accuracy of Protein Thermostability Predictions for Single Point Mutations.

Duan J, Lupyan D, Wang L. Duan J, et al. Among authors: lupyan d. Biophys J. 2020 Jul 7;119(1):115-127. doi: 10.1016/j.bpj.2020.05.020. Epub 2020 May 29. Biophys J. 2020. PMID: 32533939 Free PMC article.

6

A role for a specific cholesterol interaction in stabilizing the Apo configuration of the human A(2A) adenosine receptor.

Lyman E, Higgs C, Kim B, Lupyan D, Shelley JC, Farid R, Voth GA. Lyman E, et al. Among authors: lupyan d. Structure. 2009 Dec 9;17(12):1660-1668. doi: 10.1016/j.str.2009.10.010. Structure. 2009. PMID: 20004169 Free PMC article.

7

An analysis of core deformations in protein superfamilies.

Leo-Macias A, Lopez-Romero P, Lupyan D, Zerbino D, Ortiz AR. Leo-Macias A, et al. Among authors: lupyan d. Biophys J. 2005 Feb;88(2):1291-9. doi: 10.1529/biophysj.104.052449. Epub 2004 Nov 12. Biophys J. 2005. PMID: 15542556 Free PMC article.

8

Core deformations in protein families: a physical perspective.

Leo-Macias A, Lopez-Romero P, Lupyan D, Zerbino D, Ortiz AR. Leo-Macias A, et al. Among authors: lupyan d. Biophys Chem. 2005 Apr 1;115(2-3):125-8. doi: 10.1016/j.bpc.2004.12.016. Epub 2005 Jan 18. Biophys Chem. 2005. PMID: 15752593

9

A new progressive-iterative algorithm for multiple structure alignment.

Lupyan D, Leo-Macias A, Ortiz AR. Lupyan D, et al. Bioinformatics. 2005 Aug 1;21(15):3255-63. doi: 10.1093/bioinformatics/bti527. Epub 2005 Jun 7. Bioinformatics. 2005. PMID: 15941743

10

OPLS3: A Force Field Providing Broad Coverage of Drug-like Small Molecules and Proteins.

Harder E, Damm W, Maple J, Wu C, Reboul M, Xiang JY, Wang L, Lupyan D, Dahlgren MK, Knight JL, Kaus JW, Cerutti DS, Krilov G, Jorgensen WL, Abel R, Friesner RA. Harder E, et al. Among authors: lupyan d. J Chem Theory Comput. 2016 Jan 12;12(1):281-96. doi: 10.1021/acs.jctc.5b00864. Epub 2015 Dec 1. J Chem Theory Comput. 2016. PMID: 26584231

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