Park PJ - Search Results

1

Quantized correlation coefficient for measuring reproducibility of ChIP-chip data.

Peng S, Kuroda MI, Park PJ. Peng S, et al. Among authors: park pj. BMC Bioinformatics. 2010 Jul 27;11:399. doi: 10.1186/1471-2105-11-399. BMC Bioinformatics. 2010. PMID: 20663215 Free PMC article.

2

Linking gene expression data with patient survival times using partial least squares.

Park PJ, Tian L, Kohane IS. Park PJ, et al. Bioinformatics. 2002;18 Suppl 1:S120-7. doi: 10.1093/bioinformatics/18.suppl_1.s120. Bioinformatics. 2002. PMID: 12169539

3

Comparing expression profiles of genes with similar promoter regions.

Park PJ, Butte AJ, Kohane IS. Park PJ, et al. Bioinformatics. 2002 Dec;18(12):1576-84. doi: 10.1093/bioinformatics/18.12.1576. Bioinformatics. 2002. PMID: 12490441

4

Combining gene expression data from different generations of oligonucleotide arrays.

Hwang KB, Kong SW, Greenberg SA, Park PJ. Hwang KB, et al. Among authors: park pj. BMC Bioinformatics. 2004 Oct 25;5:159. doi: 10.1186/1471-2105-5-159. BMC Bioinformatics. 2004. PMID: 15504239 Free PMC article.

5

Comparative analysis of algorithms for identifying amplifications and deletions in array CGH data.

Lai WR, Johnson MD, Kucherlapati R, Park PJ. Lai WR, et al. Among authors: park pj. Bioinformatics. 2005 Oct 1;21(19):3763-70. doi: 10.1093/bioinformatics/bti611. Epub 2005 Aug 4. Bioinformatics. 2005. PMID: 16081473 Free PMC article.

6

High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome.

Alekseyenko AA, Larschan E, Lai WR, Park PJ, Kuroda MI. Alekseyenko AA, et al. Among authors: park pj. Genes Dev. 2006 Apr 1;20(7):848-57. doi: 10.1101/gad.1400206. Epub 2006 Mar 17. Genes Dev. 2006. PMID: 16547173 Free PMC article.

7

A multivariate approach for integrating genome-wide expression data and biological knowledge.

Kong SW, Pu WT, Park PJ. Kong SW, et al. Among authors: park pj. Bioinformatics. 2006 Oct 1;22(19):2373-80. doi: 10.1093/bioinformatics/btl401. Epub 2006 Jul 28. Bioinformatics. 2006. PMID: 16877751 Free PMC article.

8

MSL complex associates with clusters of actively transcribed genes along the Drosophila male X chromosome.

Larschan E, Alekseyenko AA, Lai WR, Park PJ, Kuroda MI. Larschan E, et al. Among authors: park pj. Cold Spring Harb Symp Quant Biol. 2006;71:385-94. doi: 10.1101/sqb.2006.71.026. Cold Spring Harb Symp Quant Biol. 2006. PMID: 17381321

9

Normalization and experimental design for ChIP-chip data.

Peng S, Alekseyenko AA, Larschan E, Kuroda MI, Park PJ. Peng S, et al. Among authors: park pj. BMC Bioinformatics. 2007 Jun 25;8:219. doi: 10.1186/1471-2105-8-219. BMC Bioinformatics. 2007. PMID: 17592629 Free PMC article.

10

MSL complex is attracted to genes marked by H3K36 trimethylation using a sequence-independent mechanism.

Larschan E, Alekseyenko AA, Gortchakov AA, Peng S, Li B, Yang P, Workman JL, Park PJ, Kuroda MI. Larschan E, et al. Among authors: park pj. Mol Cell. 2007 Oct 12;28(1):121-33. doi: 10.1016/j.molcel.2007.08.011. Mol Cell. 2007. PMID: 17936709 Free article.

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